RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 OR11H4Q8NGC9 324 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 OR14A16Q8NHC5 309 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF563Q8TA94 476 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 HOXB13Q92826 284 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 KCTD12Q96CX2 325 aaKnown RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 BAIAP2Q9UQB8 552 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF337Q9Y3M9 751 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 CLPSP04118 112 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 UCHL1P09936 223 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 TMIGD3P0DMS9 266 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 PTBP1P26599 531 aaKnown RBP eCLIP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 SSTR2P30874 369 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 GRK6P43250 576 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 EFNA3P52797 238 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ZP2Q05996 745 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 POU4F2Q12837 409 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 LINC01590Q5TEZ4 76 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 OR5M10Q6IEU7 315 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 C16orf47Q6ZP98 133 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 JAZF1Q86VZ6 243 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 PTPMT1Q8WUK0 201 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 ATOH1Q92858 354 aaPredicted RBP9.55□□□□□ -0.88
TOP3A-209ENST00000580095 SLC25A36Q96CQ1 311 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 LPAR4Q99677 370 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 SEMA4CQ9C0C4 833 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 PRDM9Q9NQV7 894 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 RCE1Q9Y256 329 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 SLC6A5Q9Y345 797 aa9.55□□□□□ -0.88
TOP3A-209ENST00000580095 TRABD2BA6NFA1 517 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ARL6IP5O75915 188 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 FBXO45P0C2W1 286 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 TACR3P29371 465 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 GDNFP39905 211 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ACTA2P62736 377 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ACTG2P63267 376 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 SNTB2Q13425 540 aaKnown RBP9.54□□□□□ -0.88
TOP3A-209ENST00000580095 KLHL26Q53HC5 615 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ALG10Q5BKT4 473 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 VWA2Q5GFL6 755 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 C1orf189Q5VU69 101 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 LIPNQ5VXI9 398 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 SLC35D2Q76EJ3 337 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 DPY19L4Q7Z388 723 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF595Q8IYB9 648 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 OR52I2Q8NH67 350 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 SLC2A12Q8TD20 617 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 PPP1R14AQ96A00 147 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 RNF166Q96A37 237 aaPredicted RBP9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ADAD1Q96M93 576 aaKnown RBP9.54□□□□□ -0.88
TOP3A-209ENST00000580095 DDOQ99489 341 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 GAL3ST1Q99999 423 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 SYT4Q9H2B2 425 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 DPAGT1Q9H3H5 408 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 KCNK15Q9H427 330 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 RXFP3Q9NSD7 469 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 NUP50Q9UKX7 468 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 MGAT4AQ9UM21 535 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 GTF2A1LQ9UNN4 478 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 A0A1W2PPC4 97 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 FAM221BA6H8Z2 402 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 EFCAB7A8K855 629 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 HCRTR2O43614 444 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ICOSLGO75144 302 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 UTS2O95399 124 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 HPXP02790 462 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 MAS1P04201 325 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 CAPZBP47756 277 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 LGALS3BPQ08380 585 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 FUT7Q11130 342 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ZNF74Q16587 644 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 ST3GAL2Q16842 350 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 RPL22L1Q6P5R6 122 aaKnown RBP9.54□□□□□ -0.88
TOP3A-209ENST00000580095 MARCH3Q86UD3 253 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 POMGNT2Q8NAT1 580 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 OR6N2Q8NGY6 317 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 AMELYQ99218 206 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 OR51J1Q9H342 316 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 SLA2Q9H6Q3 261 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 FANCFQ9NPI8 374 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 SLCO1C1Q9NYB5 712 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 GMEB2Q9UKD1 530 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 NPFFR2Q9Y5X5 522 aa9.54□□□□□ -0.88
TOP3A-209ENST00000580095 MED12Q93074 2177 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 C2orf72A6NCS6 295 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 ARHGEF9O43307 516 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 AKR7A3O95154 331 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 UBL3O95164 117 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 RPL18Q07020 188 aaKnown RBP9.53□□□□□ -0.88
TOP3A-209ENST00000580095 GAS6Q14393 721 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 TRAM1Q15629 374 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 OR6V1Q8N148 313 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 SMRP1Q8NCR6 262 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 THEM6Q8WUY1 208 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 TAAR8Q969N4 342 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 SLC25A38Q96DW6 304 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 CHIAQ9BZP6 476 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 OR10A4Q9H209 315 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 MRM2Q9UI43 246 aaKnown RBP9.53□□□□□ -0.88
TOP3A-209ENST00000580095 TRAV1-2A0A0B4J238 106 aa9.53□□□□□ -0.88
TOP3A-209ENST00000580095 TEX51A0A1B0GUA7 166 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms