RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 SLC16A7O60669 478 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 MAP3K8P41279 467 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 NANOS3P60323 173 aaKnown RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 PITPNAQ00169 270 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CD226Q15762 336 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CARD17Q5XLA6 110 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 FBXO46Q6PJ61 603 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 MAMSTRQ6ZN01 415 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 PITHD1Q9GZP4 211 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 C20orf85Q9H1P6 137 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 SEC61A2Q9H9S3 476 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CACNA1GO43497 2377 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 SHISA8B8ZZ34 492 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 M0QYG6 137 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CTNSO60931 367 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CDK2P24941 298 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 TAS2R43P59537 309 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 NSDHLQ15738 373 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 TOMM34Q15785 309 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 ETFDHQ16134 617 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CD163Q86VB7 1156 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 POMGNT2Q8NAT1 580 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 OR56B4Q8NH76 319 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 BRIX1Q8TDN6 353 aaKnown RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 YIPF5Q969M3 257 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 MARVELD1Q9BSK0 173 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 KLHL9Q9P2J3 617 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 KIAA1671Q9BY89 1806 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 E9PQ18 207 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 H7C2Y5 167 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 ECDO95905 644 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 IGHA1P01876 353 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 RBMS1P29558 406 aaKnown RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 GRK1Q15835 563 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 TMEM255AQ5JRV8 349 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 FAM180AQ6UWF9 173 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 TMEM184AQ6ZMB5 413 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 C17orf107Q6ZR85 190 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 OR51Q1Q8NH59 317 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 CREB3L1Q96BA8 519 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 MED18Q9BUE0 208 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 COMMD4Q9H0A8 199 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 NXF5Q9H1B4 397 aaKnown RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 ELL3Q9HB65 397 aaPredicted RBP12.48□□□□□ -0.41
NDEL1-204ENST00000578172 MED17Q9NVC6 651 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 C2orf42Q9NWW7 574 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 TAS2R3Q9NYW6 316 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 KCNG2Q9UJ96 466 aa12.48□□□□□ -0.41
NDEL1-204ENST00000578172 ACTC1P68032 377 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 ACTA1P68133 377 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 ZNF550Q7Z398 422 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 FOXRED2Q8IWF2 684 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 ZBTB44Q8NCP5 570 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 BAHD1Q8TBE0 780 aaPredicted RBP12.47□□□□□ -0.41
NDEL1-204ENST00000578172 KTI12Q96EK9 354 aaPredicted RBP12.47□□□□□ -0.41
NDEL1-204ENST00000578172 DUSP22Q9NRW4 184 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 FBXL2Q9UKC9 423 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 EXOGQ9Y2C4 368 aaKnown RBP12.47□□□□□ -0.41
NDEL1-204ENST00000578172 KLHDC2Q9Y2U9 406 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 LGALS8O00214 317 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 GOSR2O14653 212 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 LIMK1P53667 647 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 GALNTL5Q7Z4T8 443 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 GPAT4Q86UL3 456 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 GLB1L2Q8IW92 636 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 ZNF680Q8NEM1 530 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 KISS1RQ969F8 398 aaPredicted RBP12.47□□□□□ -0.41
NDEL1-204ENST00000578172 DHRS9Q9BPW9 319 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 DNAJB12Q9NXW2 375 aaKnown RBP12.47□□□□□ -0.41
NDEL1-204ENST00000578172 MSRAQ9UJ68 235 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 CA14Q9ULX7 337 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 A0A1B0GX12 115 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 FITM1A5D6W6 292 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 SERINC4A6NH21 518 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 RHPN2P1A8MT19 583 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 VAMP1P23763 118 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 SLC6A1P30531 599 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 TCTE1Q5JU00 501 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 SFRP5Q5T4F7 317 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 BCORP1Q8N888 145 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 NPRL2Q8WTW4 380 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 PTDSS2Q9BVG9 487 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 NRIP3Q9NQ35 241 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 PILRAQ9UKJ1 303 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 PLEKHA6Q9Y2H5 1048 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 ALPK3Q96L96 1907 aa12.47□□□□□ -0.41
NDEL1-204ENST00000578172 CCSO14618 274 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 SLC22A5O76082 557 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 SKP1P63208 163 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 LINC00303Q3SY05 128 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 DUSP19Q8WTR2 217 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 EMC6Q9BV81 110 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.46□□□□□ -0.41
NDEL1-204ENST00000578172 SLC6A15Q9H2J7 730 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 ELOVL3Q9HB03 270 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms