RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 KRT33AO76009 404 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 UMPSP11172 480 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 RHCEP18577 417 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 VLDLRP98155 873 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 FOXD4Q12950 439 aaPredicted RBP16.96■□□□□ 0.31
SS18-208ENST00000577751 NCMAPQ5T1S8 102 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 PAMR1Q6UXH9 720 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 CYP4Z1Q86W10 505 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 WDFY1Q8IWB7 410 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 RNF113BQ8IZP6 322 aaKnown RBP16.96■□□□□ 0.31
SS18-208ENST00000577751 ACOT11Q8WXI4 607 aaPredicted RBP16.96■□□□□ 0.31
SS18-208ENST00000577751 LRR1Q96L50 414 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 ALKBH3Q96Q83 286 aaPredicted RBP16.96■□□□□ 0.31
SS18-208ENST00000577751 EMC6Q9BV81 110 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 SLC17A5Q9NRA2 495 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 ACTR3BQ9P1U1 418 aa16.96■□□□□ 0.31
SS18-208ENST00000577751 AKAP6Q13023 2319 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 A0A087WUU8 490 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 PIP5K1CO60331 668 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 ROR2Q01974 943 aaKnown RBP16.95■□□□□ 0.3
SS18-208ENST00000577751 PRKCDQ05655 676 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 ALKBH2Q6NS38 261 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 NANOGNBQ7Z5D8 188 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 C20orf196Q8IYI0 205 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 OR52N5Q8NH56 324 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 BPIFA2Q96DR5 249 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 ESRP2Q9H6T0 727 aaKnown RBP16.95■□□□□ 0.3
SS18-208ENST00000577751 NPAP1Q9NZP6 1156 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 PRPF19Q9UMS4 504 aaKnown RBP16.95■□□□□ 0.3
SS18-208ENST00000577751 EDARQ9UNE0 448 aa16.95■□□□□ 0.3
SS18-208ENST00000577751 FAM32AQ9Y421 112 aaKnown RBP16.95■□□□□ 0.3
SS18-208ENST00000577751 A0A1W2PRQ8 180 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 DPRXA6NFQ7 191 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 BLOC1S5-TXNDC5H3BN57 136 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 RNF13O43567 381 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 UBOX5O94941 541 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 PLAUP00749 431 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 IFI30P13284 250 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 IFNGR1P15260 489 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 IST1P53990 364 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 RPL18Q07020 188 aaKnown RBP16.94■□□□□ 0.3
SS18-208ENST00000577751 DGCR6Q14129 220 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 PHYHD1Q5SRE7 291 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 MBOAT2Q6ZWT7 520 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 SLC35D2Q76EJ3 337 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 NRMQ8IXM6 262 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 GPR137CQ8N3F9 429 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 OR1K1Q8NGR3 316 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 OR6X1Q8NH79 312 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 SLC7A13Q8TCU3 470 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 DHRS1Q96LJ7 313 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 ADAD1Q96M93 576 aaKnown RBP16.94■□□□□ 0.3
SS18-208ENST00000577751 GPR35Q9HC97 309 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 AMDHD2Q9Y303 409 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 CREBBPQ92793 2442 aa16.94■□□□□ 0.3
SS18-208ENST00000577751 ZNF726A6NNF4 738 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 hCG_2039718K7EN88 272 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 SERPINI2O75830 405 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 H1F0P07305 194 aaKnown RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 ITGA2P17301 1181 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 CDH2P19022 906 aaPredicted RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 MAKP20794 623 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 AQP2P41181 271 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 SH3BGRP55822 239 aaPredicted RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 BIDP55957 195 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 CAMK2DQ13557 499 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 TRIM25Q14258 630 aaKnown RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 HMBOX1Q6NT76 420 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 TBPL2Q6SJ96 375 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 ZNF704Q6ZNC4 412 aaPredicted RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 MAGEE2Q8TD90 523 aaPredicted RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 BCL2L2Q92843 193 aaPredicted RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 ZNF837Q96EG3 531 aaPredicted RBP16.93■□□□□ 0.3
SS18-208ENST00000577751 NELFAQ9H3P2 528 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 MUC13Q9H3R2 512 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 CRLF2Q9HC73 371 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 PLEKHA6Q9Y2H5 1048 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 HIF3AQ9Y2N7 669 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 V9GYQ6 96 aa16.93■□□□□ 0.3
SS18-208ENST00000577751 A0A1W2PR80 420 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 DIRAS1O95057 198 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 ATE1O95260 518 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 RAF1P04049 648 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 F13BP05160 661 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 CD3EP07766 207 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 ATP6V1B2P21281 511 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 RPS4XP62701 263 aaKnown RBP16.92■□□□□ 0.3
SS18-208ENST00000577751 MS4A2Q01362 244 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 BSPH1Q075Z2 132 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 FHL1Q13642 323 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 LAPTM4AQ15012 233 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 ACKR1Q16570 336 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 CEACAM16Q2WEN9 425 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 TBRG1Q3YBR2 411 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 HIKESHIQ53FT3 197 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 CARD17Q5XLA6 110 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 LCN8Q6JVE9 175 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 ADAM5Q6NVV9 412 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 ANKRD16Q6P6B7 361 aa16.92■□□□□ 0.3
SS18-208ENST00000577751 PODNL1Q6PEZ8 512 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms