RNA–Protein interactions for RNA: ENST00000576952.1

POLR2A-208, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-208ENST00000576952 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 ADAM5Q6NVV9 412 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 TSEN54Q7Z6J9 526 aaKnown RBP13.4□□□□□ -0.26
POLR2A-208ENST00000576952 PXKQ7Z7A4 578 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 DEFB107AQ8IZN7 70 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 GPR137CQ8N3F9 429 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 KBTBD8Q8NFY9 601 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 OR1K1Q8NGR3 316 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 LILRB1Q8NHL6 650 aaPredicted RBP13.4□□□□□ -0.26
POLR2A-208ENST00000576952 AKAP1Q92667 903 aaKnown RBP eCLIP13.4□□□□□ -0.26
POLR2A-208ENST00000576952 NEUROG1Q92886 237 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 MBD6Q96DN6 1003 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 ZNF837Q96EG3 531 aaPredicted RBP13.4□□□□□ -0.26
POLR2A-208ENST00000576952 FOXC2Q99958 501 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 MAN2C1Q9NTJ4 1040 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 CD300AQ9UGN4 299 aa13.4□□□□□ -0.26
POLR2A-208ENST00000576952 ZNF469Q96JG9 3925 aaPredicted RBP13.4□□□□□ -0.26
POLR2A-208ENST00000576952 MAP1AP78559 2803 aaPredicted RBP13.4□□□□□ -0.27
POLR2A-208ENST00000576952 BLOC1S5-TXNDC5H3BN57 136 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 RNF13O43567 381 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 OR7A10O76100 309 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 HIST1H2ABP04908 130 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 HSD17B1P14061 328 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 FUT1P19526 365 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 ZP4Q12836 540 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 HMBOX1Q6NT76 420 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 C16orf89Q6UX73 402 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 HIST3H2AQ7L7L0 130 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 NANOGNBQ7Z5D8 188 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 OFCC1Q8IZS5 231 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 C17orf78Q8N4C9 275 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 FAM86B1Q8N7N1 296 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 PIK3C3Q8NEB9 887 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 HIST1H2ACQ93077 130 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 SGTBQ96EQ0 304 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 HS6ST2Q96MM7 605 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 FNDC11Q9BVV2 318 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 NELFAQ9H3P2 528 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 DCAF13Q9NV06 445 aaKnown RBP13.39□□□□□ -0.27
POLR2A-208ENST00000576952 RPS6KA6Q9UK32 745 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 AMDHD2Q9Y303 409 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
POLR2A-208ENST00000576952 CHD3Q12873 2000 aaKnown RBP13.39□□□□□ -0.27
POLR2A-208ENST00000576952 ARFGEF3Q5TH69 2177 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 A0A096LPE4 126 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 A0A1W2PPZ6 126 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 ZNF726A6NNF4 738 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 B2RBV5 119 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 RPL36A-HNRNPH2H7BZ11 118 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 M0R1B8 84 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 M0R3G1 203 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 ABCD4O14678 606 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 HS3ST1O14792 307 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 GMNNO75496 209 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 PRSS23O95084 383 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 IFNGR1P15260 489 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 HOXC12P31275 282 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 IFNA8P32881 189 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 BIDP55957 195 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 ARF1P84077 181 aaKnown RBP13.38□□□□□ -0.27
POLR2A-208ENST00000576952 RPL18Q07020 188 aaKnown RBP13.38□□□□□ -0.27
POLR2A-208ENST00000576952 SPOCK1Q08629 439 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 MELKQ14680 651 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 TRAM2Q15035 370 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 FXNQ16595 210 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 CEACAM16Q2WEN9 425 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 TBRG1Q3YBR2 411 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 SAMD4BQ5PRF9 694 aaKnown RBP13.38□□□□□ -0.27
POLR2A-208ENST00000576952 C20orf204Q6ZNR8 217 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 SLC35D2Q76EJ3 337 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 MEX3DQ86XN8 651 aaKnown RBP13.38□□□□□ -0.27
POLR2A-208ENST00000576952 C20orf196Q8IYI0 205 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 ANKK1Q8NFD2 765 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 BCL2L2Q92843 193 aaPredicted RBP13.38□□□□□ -0.27
POLR2A-208ENST00000576952 NSL1Q96IY1 281 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 ALPK1Q96QP1 1244 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 CCL19Q99731 98 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 CXXC4Q9H2H0 198 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 CRLF2Q9HC73 371 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 ENPP4Q9Y6X5 453 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 V9GYQ6 96 aa13.38□□□□□ -0.27
POLR2A-208ENST00000576952 SHISA9B4DS77 424 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 SEC14L2O76054 403 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 IGF2P01344 180 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 F13BP05160 661 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 IFI30P13284 250 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 AQP2P41181 271 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 PRPS1P60891 318 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 TUBA1BP68363 451 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 TUBA4AP68366 448 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 KLHL17Q6TDP4 642 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 KLHL24Q6TFL4 600 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 TMEM108Q6UXF1 575 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 SPNS3Q6ZMD2 512 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 TUBA1AQ71U36 451 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 NRMQ8IXM6 262 aa13.37□□□□□ -0.27
POLR2A-208ENST00000576952 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
POLR2A-208ENST00000576952 BOD1Q96IK1 185 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms