RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 KRTAP10-9P60411 292 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ISL1P61371 349 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 CSNK2A1P68400 391 aaPredicted RBP7□□□□□ -1.29
CCDC40-215ENST00000576033 SLC35A1P78382 337 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 IL1RL1Q01638 556 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 DGCR6Q14129 220 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 MELKQ14680 651 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 SLC17A1Q14916 467 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF74Q16587 644 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 FGD3Q5JSP0 725 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 PHYHD1Q5SRE7 291 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 PDSS1Q5T2R2 415 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 EEF1A1P5Q5VTE0 462 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF691Q5VV52 312 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 FOXB2Q5VYV0 432 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 SP5Q6BEB4 398 aaPredicted RBP7□□□□□ -1.29
CCDC40-215ENST00000576033 KRT80Q6KB66 452 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 XKRXQ6PP77 449 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 CASP12Q6UXS9 341 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 MEX3BQ6ZN04 569 aaKnown RBP7□□□□□ -1.29
CCDC40-215ENST00000576033 THAP5Q7Z6K1 395 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 IGFN1Q86VF2 1251 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 MCEMP1Q8IX19 187 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 OFCC1Q8IZS5 231 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 C10orf53Q8N6V4 93 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ZIC4Q8N9L1 334 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 OR10G2Q8NGC3 310 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 OR9K2Q8NGE7 335 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 OR13C2Q8NGS9 318 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 OR52J3Q8NH60 311 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 LINC01560Q8TB33 94 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 STK35Q8TDR2 534 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 DNAJA4Q8WW22 397 aaPredicted RBP7□□□□□ -1.29
CCDC40-215ENST00000576033 CYGBQ8WWM9 190 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ASB5Q8WWX0 329 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 HTRA1Q92743 480 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF566Q969W8 418 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 MUS81Q96NY9 551 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 EMC6Q9BV81 110 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 RBM24Q9BX46 236 aaKnown RBP7□□□□□ -1.29
CCDC40-215ENST00000576033 POTEKPQ9BYX7 375 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 FAM192AQ9GZU8 254 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 BCO1Q9HAY6 547 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 HHATLQ9HCP6 504 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 KCNJ16Q9NPI9 418 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF629Q9UEG4 869 aaPredicted RBP7□□□□□ -1.29
CCDC40-215ENST00000576033 PROCRQ9UNN8 238 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 FLVCR1Q9Y5Y0 555 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 PDZD2O15018 2839 aa7□□□□□ -1.29
CCDC40-215ENST00000576033 IGKV3D-15A0A087WSY6 115 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TRAV27A0A087WT01 109 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 A0A087WUU8 490 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 A0A1W2PR80 420 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 A8MXE2 369 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 MS4A18H0YCH9 400 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CDC42EP2O14613 210 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 SIAH2O43255 324 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TRAF3IP2O43734 574 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 FZD7O75084 574 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 LYZL6O75951 148 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 SEC14L2O76054 403 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 GADD45GO95257 159 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ADAP00813 363 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ANXA8P13928 327 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CDH2P19022 906 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 OPRM1P35372 400 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 POLR2IP36954 125 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 RPL5P46777 297 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 SPIBQ01892 262 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TEKQ02763 1124 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CD47Q08722 323 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 RNPS1Q15287 305 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 POU4F3Q15319 338 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 MS4A18Q3C1V0 323 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 SLC25A35Q3KQZ1 300 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ZIK1Q3SY52 487 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 FAM69AQ5T7M9 428 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TSPO2Q5TGU0 170 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CARD17Q5XLA6 110 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 OR2A2Q6IF42 318 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ALKBH2Q6NS38 261 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 PODNL1Q6PEZ8 512 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TTC33Q6PID6 262 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 PAQR6Q6TCH4 344 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CD300LDQ6UXZ3 194 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CXorf67Q86X51 503 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 NRMQ8IXM6 262 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 C8orf59Q8N0T1 100 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CLDN22Q8N7P3 220 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF555Q8NEP9 628 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 OR9Q2Q8NGE9 314 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 OR6K3Q8NGY3 331 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 MOSPD2Q8NHP6 518 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 MFSD8Q8NHS3 518 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TMEM239Q8WW34 195 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 HDAC2Q92769 488 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 RNASE6Q93091 150 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ZC3HAV1LQ96H79 300 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 FAM46AQ96IP4 442 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TXNDC15Q96J42 360 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms