RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PPP1R1CQ8WVI7 109 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 MS4A6EQ96DS6 147 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 Q96M85 177 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 COMMD9Q9P000 198 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 ZNF346Q9UL40 294 aaKnown RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 ICAM5Q9UMF0 924 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 ADAM18Q9Y3Q7 739 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 ZNF780BQ9Y6R6 833 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 A0A1B0GTH9 108 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 TMEM82A0PJX8 343 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 ZNF705EA8MWA4 302 aaPredicted RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 FAM25EA8MYX2 175 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 FARS2O95363 451 aaKnown RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 ANXA2P07355 339 aaKnown RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 AK4P27144 223 aaPredicted RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 HABP2Q14520 560 aaPredicted RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 MFSD12Q6NUT3 480 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 STEAP1BQ6NZ63 245 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 BIVMQ86UB2 503 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 NPAS4Q8IUM7 802 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 GTPBP8Q8N3Z3 284 aaPredicted RBP13.17□□□□□ -0.3
SMG6-215ENST00000574501 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 OR5K2Q8NHB8 316 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 ZPLD1Q8TCW7 415 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 C15orf40Q8WUR7 153 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 PHYHIPQ92561 330 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 ZNF681Q96N22 645 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 SDF2Q99470 211 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 GAL3ST1Q99999 423 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 SLITRK2Q9H156 845 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 MBD2Q9UBB5 411 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 STEAP1Q9UHE8 339 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
SMG6-215ENST00000574501 TRAV8-7A0A075B6U6 113 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 A0A1W2PRU2 124 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 M0QYG6 137 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 PMS2P2O95744 297 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 CD8AP01732 235 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 MNDAP41218 407 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 CAPZA1P52907 286 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 ZNF345Q14585 488 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 ZNF234Q14588 700 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 PON3Q15166 354 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 TCTN1Q2MV58 587 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 NKAIN2Q5VXU1 208 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 ARHGAP11AQ6P4F7 1023 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 ABHD17CQ6PCB6 329 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 ACOT7LQ6ZUV0 252 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 OR4N5Q8IXE1 308 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 ZSCAN1Q8NBB4 408 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 PHOSPHO1Q8TCT1 267 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 MRPL48Q96GC5 212 aaKnown RBP13.16□□□□□ -0.3
SMG6-215ENST00000574501 CNTNAP3BQ96NU0 1288 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 NMNAT3Q96T66 252 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 MENTQ9BUN1 341 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 TAS2R8Q9NYW2 309 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 MIOXQ9UGB7 285 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 KCNE5Q9UJ90 142 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 PLEKHA6Q9Y2H5 1048 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 ETV7Q9Y603 341 aa13.16□□□□□ -0.3
SMG6-215ENST00000574501 C17orf113A0A1B0GUU1 675 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 DUXAA6NLW8 204 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 CTAG2O75638 210 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 NGFRP08138 427 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 SMIM6P0DI80 62 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 ERGP11308 486 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 EPCAMP16422 314 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 CASRP41180 1078 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 DUSP8Q13202 625 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 RBM39Q14498 530 aaKnown RBP13.15□□□□□ -0.3
SMG6-215ENST00000574501 GXYLT1Q4G148 440 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 EIPR1Q53HC9 387 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 PGAP1Q75T13 922 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 POMGNT2Q8NAT1 580 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 OR4A4PQ8NGN8 299 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 OR1J4Q8NGS1 313 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 CXorf40AQ8TE69 158 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 FGF13Q92913 245 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 NUS1Q96E22 293 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 RSPH9Q9H1X1 276 aaPredicted RBP13.15□□□□□ -0.3
SMG6-215ENST00000574501 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
SMG6-215ENST00000574501 NOP16Q9Y3C1 178 aaKnown RBP13.15□□□□□ -0.3
SMG6-215ENST00000574501 FAM96BQ9Y3D0 163 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 SCN2AQ99250 2005 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 TET1Q8NFU7 2136 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 A0A1B0GTQ1 180 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 YKT6O15498 198 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 ITGB2P05107 769 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 CD1AP06126 327 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 FBXO45P0C2W1 286 aa13.15□□□□□ -0.3
SMG6-215ENST00000574501 OR8G3PP0DMU2 310 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms