RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZNF362Q5T0B9 420 aaPredicted RBP21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 ZNF324BQ6AW86 544 aaPredicted RBP21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 LAIR2Q6ISS4 152 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 BCDIN3DQ7Z5W3 292 aaKnown RBP21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 UEVLDQ8IX04 471 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 OR52E2Q8NGJ4 325 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 OR8J1Q8NGP2 316 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 OXGR1Q96P68 337 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 TXNIPQ9H3M7 391 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 RASD1Q9Y272 281 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 RIIAD1A6NNX1 92 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 WBP4O75554 376 aaKnown RBP21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 APEHP13798 732 aaKnown RBP21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 RPL5P46777 297 aaKnown RBP21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 GHDCQ8N2G8 530 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 SDR9C7Q8NEX9 313 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 TMEM163Q8TC26 289 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 SARAFQ96BY9 339 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 TUBA1CQ9BQE3 449 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 PRDM14Q9GZV8 571 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 NOX1Q9Y5S8 564 aa21.46■■□□□ 1.03
ATPAF1-213ENST00000574428 FAM183AA6NL82 134 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 IDH3BO43837 385 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 IGHMP01871 453 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 FMO3P31513 532 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 RPL27P61353 136 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 SNRPGP62308 76 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 DBPQ10586 325 aaPredicted RBP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 KLRB1Q12918 225 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 C1DQ13901 141 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 PON3Q15166 354 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 SMN1Q16637 294 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 CHMP1BQ7LBR1 199 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 FGD2Q7Z6J4 655 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 SATL1Q86VE3 508 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 CYB561A3Q8NBI2 242 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 TRUB1Q8WWH5 349 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 OTULINQ96BN8 352 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 SNRNP40Q96DI7 357 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 TXNDC15Q96J42 360 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 FAM192AQ9GZU8 254 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 MED29Q9NX70 200 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 DNAJC27Q9NZQ0 273 aa21.45■■□□□ 1.02
ATPAF1-213ENST00000574428 NBEAQ8NFP9 2946 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 ERVH48-1M5A8F1 160 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 TRAF3IP2O43734 574 aaPredicted RBP21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 MPZL2O60487 215 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 TXNDC12O95881 172 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 IFNGP01579 166 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 ZNF3P17036 446 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 KRR1Q13601 381 aaKnown RBP21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 CRMP1Q14194 572 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 MESTQ5EB52 335 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 GPR139Q6DWJ6 353 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 PCSK4Q6UW60 755 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 SLC35D2Q76EJ3 337 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 FCRLAQ7L513 359 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 WDFY1Q8IWB7 410 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 OR5M9Q8NGP3 310 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 FAR1Q8WVX9 515 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 LRR1Q96L50 414 aa21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 YTHDF1Q9BYJ9 559 aaKnown RBP21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 PAQR5Q9NXK6 330 aaPredicted RBP21.44■■□□□ 1.02
ATPAF1-213ENST00000574428 IMPA2O14732 288 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 SYNGR4O95473 234 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 SFTPCP11686 197 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ZNF43P17038 809 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ACVR1BP36896 505 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 SLC17A1Q14916 467 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ST3GAL2Q16842 350 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ABLIM2Q6H8Q1 611 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 NHLRC1Q6VVB1 395 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ARIH2OSQ8N7S6 290 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 SLC37A3Q8NCC5 494 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ZNF519Q8TB69 540 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 FNDC9Q8TBE3 224 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ZPLD1Q8TCW7 415 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 NMNAT3Q96T66 252 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 MED20Q9H944 212 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 HINT3Q9NQE9 182 aaKnown RBP21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 KLHL21Q9UJP4 597 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 MCTS1Q9ULC4 181 aaKnown RBP21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 LOC102725191A0A1B0GVB3 256 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 H7C1C5 153 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 VAMP5O95183 116 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 CDKN2AP42771 156 aaKnown RBP21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 DAP3P51398 398 aaKnown RBP21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 LCN6P62502 163 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 EMC4Q5J8M3 183 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 C6orf141Q5SZD1 244 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ARMC4Q5T2S8 1044 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 EEF1A1P5Q5VTE0 462 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 PLBD1Q6P4A8 553 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 CPOQ8IVL8 374 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 FAM26EQ8N5C1 309 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 OR9K2Q8NGE7 335 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ABHD3Q8WU67 409 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 ASB10Q8WXI3 467 aa21.43■■□□□ 1.02
ATPAF1-213ENST00000574428 EMC6Q9BV81 110 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms