RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 NAV3Q8IVL0 2385 aa9.75□□□□□ -0.85
CHD3-216ENST00000573936 NIPBLQ6KC79 2804 aaeCLIP9.74□□□□□ -0.85
CHD3-216ENST00000573936 HRNRQ86YZ3 2850 aaPredicted RBP9.74□□□□□ -0.85
CHD3-216ENST00000573936 ZNF726A6NNF4 738 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 C11orf98E9PRG8 122 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 BLOC1S5-TXNDC5H3BN57 136 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 SLC43A1O75387 559 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 DIRAS1O95057 198 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 RAP2AP10114 183 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 SAGP10523 405 aaPredicted RBP9.74□□□□□ -0.85
CHD3-216ENST00000573936 IL32P24001 234 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 NTF4P34130 210 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 IFNGR2P38484 337 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 MAGEA2P43356 314 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 POU3F1Q03052 451 aaPredicted RBP9.74□□□□□ -0.85
CHD3-216ENST00000573936 TGFBR3Q03167 851 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 FAPQ12884 760 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 FLOT2Q14254 428 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 DAZAP2Q15038 168 aaPredicted RBP9.74□□□□□ -0.85
CHD3-216ENST00000573936 TAF11Q15544 211 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 TESK1Q15569 626 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 C1orf146Q5VVC0 180 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 PODNL1Q6PEZ8 512 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 SSX8Q7RTT4 187 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 HDDC2Q7Z4H3 204 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 LSRQ86X29 649 aaPredicted RBP9.74□□□□□ -0.85
CHD3-216ENST00000573936 NRMQ8IXM6 262 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 LINC00471Q8N535 108 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 LRRC17Q8N6Y2 441 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 SLC7A13Q8TCU3 470 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 POM121Q96HA1 1249 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 ADAD1Q96M93 576 aaKnown RBP9.74□□□□□ -0.85
CHD3-216ENST00000573936 MED18Q9BUE0 208 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 LINC00470Q9BZP3 86 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 NDEL1Q9GZM8 345 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 YY1AP1Q9H869 796 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 ZNF226Q9NYT6 803 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 TAS2R16Q9NYV7 291 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 TAS2R5Q9NYW4 299 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 CRIM1Q9NZV1 1036 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 MALT1Q9UDY8 824 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 TMCC3Q9ULS5 477 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 TESMINQ9Y4I5 508 aa9.74□□□□□ -0.85
CHD3-216ENST00000573936 ANKHD1Q8IWZ3 2542 aaKnown RBP9.74□□□□□ -0.85
CHD3-216ENST00000573936 HCFC1P51610 2035 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 A0A1W2PRG6 482 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 CIB4A0PJX0 185 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 EFCAB9A8MZ26 197 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 TRAF3IP2O43734 574 aaPredicted RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 PIP5K1CO60331 668 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 ZNF432O94892 652 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 HPRP00739 348 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 TSPAN19P0C672 248 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 HLA-DOBP13765 273 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 COX5AP20674 150 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 IGHV1-2P23083 117 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 MPGP29372 298 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 RRM2P31350 389 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 SELENOPP49908 381 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 ERFP50548 548 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 ART1P52961 327 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 PRPS1P60891 318 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 SNTB1Q13884 538 aaKnown RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 CCNIQ14094 377 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 GK3PQ14409 553 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 KPNB1Q14974 876 aaKnown RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 C1QTNF12Q5T7M4 302 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 TSPO2Q5TGU0 170 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 OR7E24Q6IFN5 339 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 TBPL2Q6SJ96 375 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 TMPRSS11FQ6ZWK6 438 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 BHLHA15Q7RTS1 189 aaPredicted RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 OAFQ86UD1 273 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 P2RY8Q86VZ1 359 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 SPATA24Q86W54 205 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 ZNF433Q8N7K0 673 aaPredicted RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 OR52J3Q8NH60 311 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 HSD17B8Q92506 261 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 LRR1Q96L50 414 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 WFIKKN1Q96NZ8 548 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 ACTR6Q9GZN1 396 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 DENND2DQ9H6A0 471 aaPredicted RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 B3GAT2Q9NPZ5 323 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 INIPQ9NRY2 104 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 SLC7A10Q9NS82 523 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 STX18Q9P2W9 335 aaKnown RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 AURKCQ9UQB9 309 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 HIF3AQ9Y2N7 669 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 AKAP6Q13023 2319 aa9.73□□□□□ -0.85
CHD3-216ENST00000573936 ZNF469Q96JG9 3925 aaPredicted RBP9.73□□□□□ -0.85
CHD3-216ENST00000573936 VPS13CQ709C8 3753 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 DHRS12A0PJE2 317 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 SH3PXD2BA1X283 911 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 SLC35F4A4IF30 521 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 ZNF587BE7ETH6 402 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 TNFRSF11BO00300 401 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 LYZL6O75951 148 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 BCL10O95999 233 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms