RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 MSX2P35548 267 aaPredicted RBP24.3■■□□□ 1.48
SCARF1-207ENST00000573867 ZP4Q12836 540 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 KRT72Q14CN4 511 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 GKAP1Q5VSY0 366 aaPredicted RBP24.3■■□□□ 1.48
SCARF1-207ENST00000573867 ADAM5Q6NVV9 412 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 ABHD12BQ7Z5M8 362 aaPredicted RBP24.3■■□□□ 1.48
SCARF1-207ENST00000573867 OFCC1Q8IZS5 231 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 BCL2L2Q92843 193 aaPredicted RBP24.3■■□□□ 1.48
SCARF1-207ENST00000573867 ALPK1Q96QP1 1244 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 GPR35Q9HC97 309 aa24.3■■□□□ 1.48
SCARF1-207ENST00000573867 PRRC2AP48634 2157 aaKnown RBP24.29■■□□□ 1.48
SCARF1-207ENST00000573867 RPL36A-HNRNPH2H7BZ11 118 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 OR7A10O76100 309 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 HSD17B1P14061 328 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 SPOCK1Q08629 439 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 ST3GAL3Q11203 375 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 TBRG1Q3YBR2 411 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 C20orf204Q6ZNR8 217 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 C20orf196Q8IYI0 205 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 CDRT15Q96T59 188 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 ADAM21Q9UKJ8 722 aa24.29■■□□□ 1.48
SCARF1-207ENST00000573867 SHISA9B4DS77 424 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 IGF2P01344 180 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 UMPSP11172 480 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 IFNGR1P15260 489 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 FUT1P19526 365 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 HMBOX1Q6NT76 420 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 FKBP9P1Q75LS8 142 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 SSX8Q7RTT4 187 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 GPR137CQ8N3F9 429 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 CCDC197Q8NCU1 140 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 PIK3C3Q8NEB9 887 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 SGTBQ96EQ0 304 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 DCAF13Q9NV06 445 aaKnown RBP24.28■■□□□ 1.48
SCARF1-207ENST00000573867 AMDHD2Q9Y303 409 aa24.28■■□□□ 1.48
SCARF1-207ENST00000573867 M0R3G1 203 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 ABCD4O14678 606 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 AKAP8O43823 692 aaKnown RBP24.27■■□□□ 1.48
SCARF1-207ENST00000573867 ARF1P84077 181 aaKnown RBP24.27■■□□□ 1.48
SCARF1-207ENST00000573867 CAMK2DQ13557 499 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 CEACAM16Q2WEN9 425 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 NANOGNBQ7Z5D8 188 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 MEX3DQ86XN8 651 aaKnown RBP24.27■■□□□ 1.48
SCARF1-207ENST00000573867 KRTAP1-3Q8IUG1 177 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 DEFB107AQ8IZN7 70 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 ZNF611Q8N823 705 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 HS6ST2Q96MM7 605 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 CCL19Q99731 98 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 CRLF2Q9HC73 371 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 BEX4Q9NWD9 120 aaPredicted RBP24.27■■□□□ 1.48
SCARF1-207ENST00000573867 MED31Q9Y3C7 131 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 ZNF469Q96JG9 3925 aaPredicted RBP24.27■■□□□ 1.48
SCARF1-207ENST00000573867 CADP27708 2225 aa24.27■■□□□ 1.48
SCARF1-207ENST00000573867 ITPR3Q14573 2671 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 A0A096LPE4 126 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 A0A1W2PPZ6 126 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 M0R1B8 84 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 RNF13O43567 381 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 OR6A2O95222 327 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 CD40P25942 277 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 BIDP55957 195 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 MELKQ14680 651 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 ZNF672Q499Z4 452 aaPredicted RBP24.26■■□□□ 1.47
SCARF1-207ENST00000573867 SAMD4BQ5PRF9 694 aaKnown RBP24.26■■□□□ 1.47
SCARF1-207ENST00000573867 SLC35D2Q76EJ3 337 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 ANKK1Q8NFD2 765 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 LIPHQ8WWY8 451 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 PIP5K1AQ99755 562 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 GORASP2Q9H8Y8 452 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 RPS6KA6Q9UK32 745 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 ENPP4Q9Y6X5 453 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 ALPK2Q86TB3 2170 aa24.26■■□□□ 1.47
SCARF1-207ENST00000573867 BLOC1S5-TXNDC5H3BN57 136 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 SEC14L2O76054 403 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 HIST1H2ABP04908 130 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 TSPAN19P0C672 248 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 PRPS1P60891 318 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 TUBA1BP68363 451 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 TUBA4AP68366 448 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 RPL18Q07020 188 aaKnown RBP24.25■■□□□ 1.47
SCARF1-207ENST00000573867 ANKRD16Q6P6B7 361 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 TUBA1AQ71U36 451 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 HIST3H2AQ7L7L0 130 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 MOSPD2Q8NHP6 518 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 HIST1H2ACQ93077 130 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 C7orf34Q96L11 122 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 LRR1Q96L50 414 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 FNDC11Q9BVV2 318 aa24.25■■□□□ 1.47
SCARF1-207ENST00000573867 F8P00451 2351 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 T-ENOLP0DO92 83 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 MAKP20794 623 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 AQP2P41181 271 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 SH3BGRP55822 239 aaPredicted RBP24.24■■□□□ 1.47
SCARF1-207ENST00000573867 TRAM2Q15035 370 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 C16orf89Q6UX73 402 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 TMEM108Q6UXF1 575 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 MAGEE2Q8TD90 523 aaPredicted RBP24.24■■□□□ 1.47
SCARF1-207ENST00000573867 NSL1Q96IY1 281 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 NDUFAF4Q9P032 175 aa24.24■■□□□ 1.47
SCARF1-207ENST00000573867 V9GYQ6 96 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms