RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 C5orf46Q6UWT4 87 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 TMPPEQ6ZT21 453 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 ZDHHC21Q8IVQ6 265 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 STK35Q8TDR2 534 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 ZHX1-C8orf76Q96EF9 292 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 RSRC1Q96IZ7 334 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 ZNF300Q96RE9 604 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 EPYCQ99645 322 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 TRAF4Q9BUZ4 470 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 TAPBPLQ9BX59 468 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 RHCGQ9UBD6 479 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 GDF2Q9UK05 429 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 A4GNTQ9UNA3 340 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 ALPK2Q86TB3 2170 aa13.04□□□□□ -0.32
NPLOC4-207ENST00000572346 STAB1Q9NY15 2570 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 DHRS12A0PJE2 317 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 ZC3H12DA2A288 527 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 SHISA9B4DS77 424 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 TLX2O43763 284 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 CD5LO43866 347 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 CYTIPO60759 359 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 DIRAS1O95057 198 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 THRBP10828 461 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 RHCEP18577 417 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 GTF2E2P29084 291 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 DIO1P49895 249 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 VLDLRP98155 873 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 TRAM2Q15035 370 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 C1orf140Q5VVS0 124 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 DTX2Q86UW9 622 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 OFCC1Q8IZS5 231 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 C10orf53Q8N6V4 93 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 ARL5BQ96KC2 179 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 GRIP2Q9C0E4 1043 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 MAGIXQ9H6Y5 334 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 NDUFAF4Q9P032 175 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 MXRA5Q9NR99 2828 aa13.03□□□□□ -0.32
NPLOC4-207ENST00000572346 ERICH4A6NGS2 130 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 ZNF724A8MTY0 619 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 OR2T1O43869 369 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 GPIP06744 558 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 H1F0P07305 194 aaKnown RBP13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 COX5AP20674 150 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 PTNP21246 168 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 IGHV1-2P23083 117 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 ERFP50548 548 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 SMIM11AP58511 58 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 SLC35A1P78382 337 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 SPIBQ01892 262 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 OR7A5Q15622 319 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 TIMM23BQ5SRD1 257 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 HMBOX1Q6NT76 420 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 RRM2BQ7LG56 351 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 TSPYL5Q86VY4 417 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 HIPK1Q86Z02 1210 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 NKAIN4Q8IVV8 208 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 SLC25A36Q96CQ1 311 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 MUCL1Q96DR8 90 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 C7orf34Q96L11 122 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 HS6ST2Q96MM7 605 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 ZNF347Q96SE7 839 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 NAA11Q9BSU3 229 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 TMEM43Q9BTV4 400 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 BARX1Q9HBU1 254 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 IL1RAPQ9NPH3 570 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 YAE1D1Q9NRH1 226 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 FAIMQ9NVQ4 179 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 PLCE1Q9P212 2302 aa13.02□□□□□ -0.33
NPLOC4-207ENST00000572346 TRAV36DV7A0A075B6V5 113 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 KPNA4O00629 521 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 ABCD4O14678 606 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 PMS2P2O95744 297 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 MT-ND1P03886 318 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 THY1P04216 161 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 SEMG1P04279 462 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 RAP2AP10114 183 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 HOXB6P17509 224 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 RPS5P46782 204 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 CDH11P55287 796 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 FGD3Q5JSP0 725 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 GALNT5Q7Z7M9 940 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 LSRQ86X29 649 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 ZNF100Q8IYN0 542 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 ADGRG5Q8IZF4 528 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 PIK3C3Q8NEB9 887 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 CANT1Q8WVQ1 401 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 KTI12Q96EK9 354 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 YY1AP1Q9H869 796 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 NMNAT1Q9HAN9 279 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 B3GALT5Q9Y2C3 310 aa13.01□□□□□ -0.33
NPLOC4-207ENST00000572346 IGKV1D-42A0A075B6H8 117 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 OR5H1A6NKK0 313 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 FFAR1O14842 300 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 DNPH1O43598 174 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms