RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 OR2T4Q8NH00 348 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 PELI1Q96FA3 418 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 TXNDC15Q96J42 360 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 ABHD1Q96SE0 405 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 VSX1Q9NZR4 365 aaPredicted RBP14.79□□□□□ -0.04
RAB40B-206ENST00000571995 WDFY4Q6ZS81 3184 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 SUSD5O60279 629 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 AKR7A3O95154 331 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 ATF1P18846 271 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 CDKN2AP42771 156 aaKnown RBP14.79□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF41P51814 821 aaPredicted RBP14.79□□□□□ -0.04
RAB40B-206ENST00000571995 ACTC1P68032 377 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 ACTA1P68133 377 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 FGFBP1Q14512 234 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 C9orf135Q5VTT2 229 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 GARNL3Q5VVW2 1013 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF782Q6ZMW2 699 aaPredicted RBP14.79□□□□□ -0.04
RAB40B-206ENST00000571995 MDGA2Q7Z553 956 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 NOXA1Q86UR1 476 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 OR52N1Q8NH53 320 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 SYNPRQ8TBG9 265 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 ZNRF4Q8WWF5 429 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 PLEKHA1Q9HB21 404 aa14.79□□□□□ -0.04
RAB40B-206ENST00000571995 METTL12A8MUP2 240 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 PATE3B3GLJ2 98 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 KLK3P07288 261 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 GPR85P60893 370 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 ZMYND11Q15326 602 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 RPL13AP3Q6NVV1 102 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 GUSBP11Q6P575 273 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 MS4A15Q8N5U1 240 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 OR5D18Q8NGL1 313 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 S100A16Q96FQ6 103 aaKnown RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 DPCDQ9BVM2 203 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 GAREM1Q9H706 876 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 KCNG2Q9UJ96 466 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 ARPC1BO15143 372 aaKnown RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 PLA2G10O15496 165 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 MPZL1O95297 269 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 ARSBP15848 533 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 SRYQ05066 204 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 EIF2B1Q14232 305 aaKnown RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 FOXRED2Q8IWF2 684 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 RNF113BQ8IZP6 322 aaKnown RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 OR51D1Q8NGF3 324 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF417Q8TAU3 575 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 CASTOR1Q8WTX7 329 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 SLC7A6Q92536 515 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 FAM71F1Q96KD3 344 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF587Q96SQ5 575 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 STACQ99469 402 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 RBFOX1Q9NWB1 397 aaKnown RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 CGGBP1Q9UFW8 167 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 PTRH2Q9Y3E5 179 aaKnown RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 PCDHGB2Q9Y5G2 931 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 CACNG2Q9Y698 323 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 H0YC42 278 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 MEN1O00255 615 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 BHLHE40O14503 412 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 TAS2R43P59537 309 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 OR10AC1Q8NH08 325 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 DEDD2Q8WXF8 326 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 AKAP1Q92667 903 aaKnown RBP eCLIP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 CLEC4MQ9H2X3 399 aaPredicted RBP14.78□□□□□ -0.04
RAB40B-206ENST00000571995 ERVMER34-1Q9H9K5 563 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 LIN7BQ9HAP6 207 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 ADGRL4Q9HBW9 690 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 APMAPQ9HDC9 416 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 KLK11Q9UBX7 282 aa14.78□□□□□ -0.04
RAB40B-206ENST00000571995 MBTPS2O43462 519 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 SLC19A2O60779 497 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 CT45A8P0DMV1 189 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 CT45A9P0DMV2 189 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 RFC3P40938 356 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 INPP5JQ15735 1006 aaPredicted RBP14.77□□□□□ -0.04
RAB40B-206ENST00000571995 CT45A2Q5DJT8 189 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 HBMQ6B0K9 141 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 POGLUT1Q8NBL1 392 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 BRIX1Q8TDN6 353 aaKnown RBP14.77□□□□□ -0.04
RAB40B-206ENST00000571995 MGAT4AQ9UM21 535 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 PIEZO2Q9H5I5 2752 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 ZNF726A6NNF4 738 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 DCTN6O00399 190 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 NKX2-2O95096 273 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 NSA2O95478 260 aaKnown RBP14.77□□□□□ -0.04
RAB40B-206ENST00000571995 LYSMD4Q5XG99 296 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 MAMDC2Q7Z304 686 aaPredicted RBP14.77□□□□□ -0.04
RAB40B-206ENST00000571995 C3orf49Q96BT1 292 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 EXO5Q9H790 373 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 KLHL13Q9P2N7 655 aa14.77□□□□□ -0.04
RAB40B-206ENST00000571995 FABP7O15540 132 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 GTF2F2P13984 249 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 HSD11B1P28845 292 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 ARFIP1P53367 373 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 FXYD6P3P58550 94 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 FMODQ06828 376 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 APOOLQ6UXV4 268 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 NDUFAF7Q7L592 441 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 OR2T35Q8NGX2 323 aa14.77□□□□□ -0.05
RAB40B-206ENST00000571995 SNAPC3Q92966 411 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms