RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 SLC47A1Q96FL8 570 aa13.43□□□□□ -0.26
TSR1-202ENST00000571806 SLC41A3Q96GZ6 507 aa13.43□□□□□ -0.26
TSR1-202ENST00000571806 ZNF587Q96SQ5 575 aaPredicted RBP13.43□□□□□ -0.26
TSR1-202ENST00000571806 SEC61A2Q9H9S3 476 aa13.43□□□□□ -0.26
TSR1-202ENST00000571806 NOX3Q9HBY0 568 aa13.43□□□□□ -0.26
TSR1-202ENST00000571806 B3GNT2Q9NY97 397 aa13.43□□□□□ -0.26
TSR1-202ENST00000571806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.42□□□□□ -0.261e-11■■■■■ 37.5
TSR1-202ENST00000571806 TMEM120BA0PK00 339 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 SH3PXD2BA1X283 911 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 PRORSD1PA6NEY8 169 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 B4DSR2 109 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 ENTPD5O75356 428 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 ADRA2AP08913 450 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 DVL1P1P54792 670 aaPredicted RBP13.42□□□□□ -0.26
TSR1-202ENST00000571806 CDH15P55291 814 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 WDR4P57081 412 aaKnown RBP13.42□□□□□ -0.26
TSR1-202ENST00000571806 NCALDP61601 193 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 RPS23P62266 143 aaKnown RBP13.42□□□□□ -0.26
TSR1-202ENST00000571806 HOXC5Q00444 222 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 TRMT5Q32P41 509 aaKnown RBP13.42□□□□□ -0.26
TSR1-202ENST00000571806 GTDC1Q4AE62 458 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 KRT80Q6KB66 452 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 DHRS4L2Q6PKH6 230 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 C20orf196Q8IYI0 205 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 MRPL24Q96A35 216 aaKnown RBP13.42□□□□□ -0.26
TSR1-202ENST00000571806 SOX7Q9BT81 388 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 ASPNQ9BXN1 380 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 PAIP1Q9H074 479 aaKnown RBP13.42□□□□□ -0.26
TSR1-202ENST00000571806 TESQ9UGI8 421 aaKnown RBP13.42□□□□□ -0.26
TSR1-202ENST00000571806 NOX1Q9Y5S8 564 aa13.42□□□□□ -0.26
TSR1-202ENST00000571806 A0A087WUJ7 227 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 A0A1B0GWA3 101 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 ZNF726A6NNF4 738 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 MS4A18H0YCH9 400 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 M0R233 179 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 M0R3G1 203 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 TRAF3IP2O43734 574 aaPredicted RBP13.41□□□□□ -0.26
TSR1-202ENST00000571806 GLRXP35754 106 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 MRPL19P49406 292 aaKnown RBP13.41□□□□□ -0.26
TSR1-202ENST00000571806 MS4A18Q3C1V0 323 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 REEP3Q6NUK4 255 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 MYPOPQ86VE0 399 aaPredicted RBP13.41□□□□□ -0.26
TSR1-202ENST00000571806 CDK20Q8IZL9 346 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 ZCCHC24Q8N2G6 241 aaKnown RBP13.41□□□□□ -0.26
TSR1-202ENST00000571806 MAL2Q969L2 176 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 ZNF837Q96EG3 531 aaPredicted RBP13.41□□□□□ -0.26
TSR1-202ENST00000571806 SNX18Q96RF0 628 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 TMEM27Q9HBJ8 222 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 MRPL39Q9NYK5 338 aaKnown RBP13.41□□□□□ -0.26
TSR1-202ENST00000571806 NKIRAS1Q9NYS0 192 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 KLHL14Q9P2G3 628 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 REV1Q9UBZ9 1251 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 SEC14L4Q9UDX3 406 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 RAB21Q9UL25 225 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 CORO2BQ9UQ03 480 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 POFUT2Q9Y2G5 429 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 GMEB1Q9Y692 573 aa13.41□□□□□ -0.26
TSR1-202ENST00000571806 IGKV1D-42A0A075B6H8 117 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 ZNF503-AS2A6NEH8 195 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 SERPINB7O75635 380 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 NUDT7P0C024 238 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 CD79AP11912 226 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 ZNF35P13682 527 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 ZNF14P17017 642 aaPredicted RBP13.4□□□□□ -0.26
TSR1-202ENST00000571806 LSP1P33241 339 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 STX1BP61266 288 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 GALK2Q01415 458 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 PUDPQ08623 228 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 LRIF1Q5T3J3 769 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
TSR1-202ENST00000571806 ZNF813Q6ZN06 617 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 PXKQ7Z7A4 578 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 LSRQ86X29 649 aaPredicted RBP13.4□□□□□ -0.26
TSR1-202ENST00000571806 OR9I1Q8NGQ6 314 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 MGARPQ8TDB4 240 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 ZNF607Q96SK3 696 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 SLC13A4Q9UKG4 626 aa13.4□□□□□ -0.26
TSR1-202ENST00000571806 UBL3O95164 117 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 TGDSO95455 350 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 RAB36O95755 333 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 MT-ATP6P00846 226 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 HLA-HP01893 362 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 IGFBP1P08833 259 aaPredicted RBP13.39□□□□□ -0.27
TSR1-202ENST00000571806 ARAFP10398 606 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 HOXB9P17482 250 aaPredicted RBP13.39□□□□□ -0.27
TSR1-202ENST00000571806 ACHEP22303 614 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 HTR2AP28223 471 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 IL2RGP31785 369 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 TMEM33P57088 247 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 MRPS11P82912 194 aaKnown RBP13.39□□□□□ -0.27
TSR1-202ENST00000571806 CDK6Q00534 326 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 PMS2P3Q13401 168 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 GKAP1Q5VSY0 366 aaPredicted RBP13.39□□□□□ -0.27
TSR1-202ENST00000571806 SLC2A7Q6PXP3 512 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 DEF8Q6ZN54 512 aa13.39□□□□□ -0.27
TSR1-202ENST00000571806 PIWIL3Q7Z3Z3 882 aaKnown RBP13.39□□□□□ -0.27
TSR1-202ENST00000571806 GLCCI1Q86VQ1 547 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms