RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 OBP2BQ9NPH6 170 aa11.96□□□□□ -0.49
RAB40B-204ENST00000571554 ADAM21Q9UKJ8 722 aa11.96□□□□□ -0.49
RAB40B-204ENST00000571554 SLC7A7Q9UM01 511 aa11.96□□□□□ -0.49
RAB40B-204ENST00000571554 CORINQ9Y5Q5 1042 aa11.96□□□□□ -0.49
RAB40B-204ENST00000571554 ABCA1O95477 2261 aa11.96□□□□□ -0.49
RAB40B-204ENST00000571554 RPL36A-HNRNPH2H7BZ11 118 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 H7C417 338 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 PLPP3O14495 311 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 CHP2O43745 196 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 AKAP8O43823 692 aaKnown RBP11.95□□□□□ -0.5
RAB40B-204ENST00000571554 SHOX2O60902 331 aaPredicted RBP11.95□□□□□ -0.5
RAB40B-204ENST00000571554 LYPD3O95274 346 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 CH25HO95992 272 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 CRYAAP02489 173 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 ADORA3P0DMS8 318 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 GZMMP51124 257 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 ARFIP2P53365 341 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 CRYBA2P53672 197 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 SH3BGRP55822 239 aaPredicted RBP11.95□□□□□ -0.5
RAB40B-204ENST00000571554 CHRNB3Q05901 458 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 VMACQ2NL98 169 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 MMEL1Q495T6 779 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 REP15Q6BDI9 236 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 NANOGP8Q6NSW7 305 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 ZNF613Q6PF04 617 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 PATL1Q86TB9 770 aaKnown RBP11.95□□□□□ -0.5
RAB40B-204ENST00000571554 C20orf196Q8IYI0 205 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 LRRC17Q8N6Y2 441 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 ANKS4BQ8N8V4 417 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 ADPRHL1Q8NDY3 354 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 MAGEE2Q8TD90 523 aaPredicted RBP11.95□□□□□ -0.5
RAB40B-204ENST00000571554 ADAMTS16Q8TE57 1224 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
RAB40B-204ENST00000571554 SORCS2Q96PQ0 1159 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 TMEM43Q9BTV4 400 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 KATNB1Q9BVA0 655 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 NANOGQ9H9S0 305 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 NOX3Q9HBY0 568 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 YAE1D1Q9NRH1 226 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 CA10Q9NS85 328 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 MRPL39Q9NYK5 338 aaKnown RBP11.95□□□□□ -0.5
RAB40B-204ENST00000571554 PMF1-BGLAPU3KQ54 211 aa11.95□□□□□ -0.5
RAB40B-204ENST00000571554 CHD3Q12873 2000 aaKnown RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 ZNF99A8MXY4 864 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 FXYD1O00168 92 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 MRASO14807 208 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 FMO6PO60774 539 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 IGLV1-44P01699 117 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 HLA-HP01893 362 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 VIMP08670 466 aaKnown RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 OR4A8P0C604 315 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 TROVE2P10155 538 aaKnown RBP eCLIP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 CD79AP11912 226 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 BIDP55957 195 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 PIGFQ07326 219 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 KLF10Q13118 480 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 CYLC2Q14093 348 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 MELKQ14680 651 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 MFSD13AQ14CX5 517 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 CARTPTQ16568 116 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 SWT1Q5T5J6 900 aaKnown RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 METTL21CQ5VZV1 264 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 TTC33Q6PID6 262 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 LINC00114Q6XXX2 140 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 SLC46A3Q7Z3Q1 461 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 SNX32Q86XE0 403 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 SCAIQ8N9R8 606 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 OR10H5Q8NGA6 315 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 OR6N1Q8NGY5 312 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 OR5J2Q8NH18 312 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 OR6S1Q8NH40 331 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 TSPEARQ8WU66 669 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 FAM168AQ92567 244 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 LRRC58Q96CX6 371 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 VRK1Q99986 396 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 ULBP2Q9BZM5 246 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 ZNF446Q9NWS9 450 aa11.94□□□□□ -0.5
RAB40B-204ENST00000571554 CRNNQ9UBG3 495 aaPredicted RBP11.94□□□□□ -0.5
RAB40B-204ENST00000571554 A0A096LNT2 108 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 LOC100653049A0A140TA62 436 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 LOC102725191A0A1B0GVB3 256 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 TRAPPC13A5PLN9 417 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 ZNF726A6NNF4 738 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 CD5LO43866 347 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 KRT34O76011 436 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 OR6A2O95222 327 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 IGKV3-15P01624 115 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 C8BP07358 591 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 BMP4P12644 408 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 IFNGR1P15260 489 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 B4GALT1P15291 398 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 CBR1P16152 277 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 THBS4P35443 961 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 SERPINF1P36955 418 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 EFNA4P52798 201 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 SNRPD2P62316 118 aaKnown RBP11.93□□□□□ -0.5
RAB40B-204ENST00000571554 GUCY1A3Q02108 690 aa11.93□□□□□ -0.5
RAB40B-204ENST00000571554 HGFACQ04756 655 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms