RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MAGIXQ9H6Y5 334 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
CCDC40-205ENST00000571028 ERICH4A6NGS2 130 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 AQP7P3A6NL99 342 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 FTCDNL1E5RQL4 147 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 GNGT2O14610 69 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 SS18L1O75177 396 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-205ENST00000571028 OR7A10O76100 309 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 OR6A2O95222 327 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 YES1P07947 543 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 RAP2AP10114 183 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 FUT1P19526 365 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 AGTR1P30556 359 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 GPR4P46093 362 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 ATP5J2P56134 94 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 SMIM11AP58511 58 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 EEF1A1P5Q5VTE0 462 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 ABLIM2Q6H8Q1 611 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 H1FNTQ75WM6 255 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-205ENST00000571028 CDK20Q8IZL9 346 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF610Q8N9Z0 462 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 SLC7A13Q8TCU3 470 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 ACOT11Q8WXI4 607 aaPredicted RBP11.77□□□□□ -0.53
CCDC40-205ENST00000571028 STARD4Q96DR4 205 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF347Q96SE7 839 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF426Q9BUY5 554 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 SLC19A3Q9BZV2 496 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 NANSQ9NR45 359 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 GLRX2Q9NS18 164 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 NOSIPQ9Y314 301 aaKnown RBP11.77□□□□□ -0.53
CCDC40-205ENST00000571028 ARHGAP21Q5T5U3 1957 aa11.77□□□□□ -0.53
CCDC40-205ENST00000571028 TCRBV3S1A0A5B6 114 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 DEFB108AA8MXU0 73 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 ANKRD65E5RJM6 399 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 BLOC1S5-TXNDC5H3BN57 136 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 TNFRSF11BO00300 401 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 PHF1O43189 567 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-205ENST00000571028 FKBP6O75344 327 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 CST1P01037 141 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 IGHV3-9P01782 118 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 CRHP06850 196 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 ADORA3P0DMS8 318 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 SAGP10523 405 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-205ENST00000571028 H3F3AP84243 136 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 TNK1Q13470 666 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 CCNIQ14094 377 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 SLC17A1Q14916 467 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 KPNB1Q14974 876 aaKnown RBP11.76□□□□□ -0.53
CCDC40-205ENST00000571028 MFSD13AQ14CX5 517 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 SEC23BQ15437 767 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 CHRFAM7AQ494W8 412 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 OR2T5Q6IEZ7 315 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 CASP12Q6UXS9 341 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 MBOAT2Q6ZWT7 520 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 SLC46A3Q7Z3Q1 461 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 NANOGNBQ7Z5D8 188 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF100Q8IYN0 542 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 MAPK1IP1LQ8NDC0 245 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 OR4K5Q8NGD3 323 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 OR9K2Q8NGE7 335 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 OR2T29Q8NH02 315 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 OR5J2Q8NH18 312 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 POP5Q969H6 163 aaKnown RBP11.76□□□□□ -0.53
CCDC40-205ENST00000571028 BPIFA2Q96DR5 249 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 WFIKKN1Q96NZ8 548 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 RAB3IPQ96QF0 476 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-205ENST00000571028 FKRPQ9H9S5 495 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 YAE1D1Q9NRH1 226 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 EMC3Q9P0I2 261 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 ING1Q9UK53 422 aaPredicted RBP11.76□□□□□ -0.53
CCDC40-205ENST00000571028 TMCC3Q9ULS5 477 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 RASD1Q9Y272 281 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 CORINQ9Y5Q5 1042 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 U3KQV3 271 aa11.76□□□□□ -0.53
CCDC40-205ENST00000571028 MPDZO75970 2070 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 A0A1W2PRQ8 180 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF716A6NP11 495 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 A8MXE2 369 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 EFCAB9A8MZ26 197 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 MS4A18H0YCH9 400 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 GPR171O14626 319 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 RNF13O43567 381 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 TLX2O43763 284 aaPredicted RBP11.75□□□□□ -0.53
CCDC40-205ENST00000571028 OR10H3O60404 316 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 TIPRLO75663 272 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 MT-ATP6P00846 226 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 HLA-DOBP13765 273 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 ZNF43P17038 809 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 MAKP20794 623 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 CRYGSP22914 178 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 P2RY4P51582 365 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 NR1H2P55055 460 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 CLDN17P56750 224 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 DGCR6Q14129 220 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 MS4A18Q3C1V0 323 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 AAED1Q7RTV5 226 aa11.75□□□□□ -0.53
CCDC40-205ENST00000571028 PIWIL3Q7Z3Z3 882 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms