RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KCNK13Q9HB14 408 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 EML4Q9HC35 981 aaKnown RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 EQTNQ9NQ60 294 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SLC35C2Q9NQQ7 365 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PRTFDC1Q9NRG1 225 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 AGPAT4Q9NRZ5 378 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.42□□□□□ -1.86
NUP88-202ENST00000570937 LYARQ9NX58 379 aaKnown RBP3.42□□□□□ -1.86
NUP88-202ENST00000570937 TMEM216Q9P0N5 145 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 VPS29Q9UBQ0 182 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PCTPQ9UKL6 214 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PSME2Q9UL46 239 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 RNF11Q9Y3C5 154 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PCM1Q15154 2024 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 PTPRQQ9UMZ3 2332 aa3.42□□□□□ -1.86
NUP88-202ENST00000570937 FAM208BQ5VWN6 2430 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 TRAV17A0A0B4J275 112 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 A0A0G2JN53 185 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 GNG14A0A1W2PPG7 69 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 A0A1W2PPM1 405 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 ANKRD61A6NGH8 418 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 A8MT66 165 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SAP18O00422 153 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 RGS16O15492 202 aaPredicted RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 MYO1DO94832 1006 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SCELO95171 688 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SHBGP04278 402 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 KLK1P06870 262 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 RPS17P08708 135 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 FAM58BPP0C7Q3 252 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 CD22P20273 847 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 PIK3R1P27986 724 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 HMOX2P30519 316 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SERPINB5P36952 375 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 CYB561P49447 251 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 TNFSF10P50591 281 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 MAPK12P53778 367 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 CDH13P55290 713 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 DNAJB13P59910 316 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 TRA2BP62995 288 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 BTG2P78543 158 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 INAQ16352 499 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 KRT71Q3SY84 523 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 KLHL26Q53HC5 615 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SPIN4Q56A73 249 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 ACER2Q5QJU3 275 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 ZNF678Q5SXM1 525 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 H3F3CQ6NXT2 135 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 IGFL2Q6UWQ7 119 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 ZYG11AQ6WRX3 759 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 Q6ZS92 163 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 PRSS41Q7RTY9 318 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 GTSCR1Q86UQ5 136 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 RPS19BP1Q86WX3 136 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 ZCCHC7Q8N3Z6 543 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 B3GNT7Q8NFL0 401 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 OR4F6Q8NGB9 312 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 OR52B6Q8NGF0 335 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 OR5L2Q8NGL0 311 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SELENOMQ8WWX9 145 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 HAS2Q92819 552 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 RIT1Q92963 219 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SLAMF9Q96A28 289 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SPACA9Q96E40 222 aaPredicted RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 VMP1Q96GC9 406 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 IMMP1LQ96LU5 166 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 DGAT2Q96PD7 388 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 CCT7Q99832 543 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 RBM4BQ9BQ04 359 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 UTP23Q9BRU9 249 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 TMEM109Q9BVC6 243 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 FAIM2Q9BWQ8 316 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 DEFB126Q9BYW3 111 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 SHCBP1LQ9BZQ2 653 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 CENPHQ9H3R5 247 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 RPF2Q9H7B2 306 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 Q9N2K0 584 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 MID1IP1Q9NPA3 183 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 ADAP2Q9NPF8 381 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 RRAGDQ9NQL2 400 aaPredicted RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.41□□□□□ -1.86
NUP88-202ENST00000570937 PNO1Q9NRX1 252 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 MRPL15Q9P015 296 aaKnown RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 COPS7AQ9UBW8 275 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 LGALS13Q9UHV8 139 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 DAPK2Q9UIK4 370 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 PLLPQ9Y342 182 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 V9GYY5 206 aaPredicted RBP3.41□□□□□ -1.86
NUP88-202ENST00000570937 ZFHX4Q86UP3 3567 aa3.41□□□□□ -1.86
NUP88-202ENST00000570937 IGSF10Q6WRI0 2623 aa3.4□□□□□ -1.86
NUP88-202ENST00000570937 IGKV3D-11A0A0A0MRZ8 115 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 OR5H15A6NDH6 313 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 SAGE2PA6NJ88 616 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 A8MUA0 341 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 C17orf105B2RV13 164 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 G3V2L1 256 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 KLRC4-KLRK1H3BQV0 150 aa3.4□□□□□ -1.87
NUP88-202ENST00000570937 K7EM74 188 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms