RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PCGF2P35227 344 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 CDH12P55289 794 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 DSCR9P59020 149 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 SELPLGQ14242 412 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 INTS11Q5TA45 600 aaKnown RBP10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 METTL21CQ5VZV1 264 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 DNM1P46Q6ZS02 220 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 PATL1Q86TB9 770 aaKnown RBP10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 SCAIQ8N9R8 606 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 OR2M2Q96R28 347 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 MCHR1Q99705 422 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 TMEM43Q9BTV4 400 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 KATNB1Q9BVA0 655 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 TMEM120AQ9BXJ8 343 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 KAT8Q9H7Z6 458 aaKnown RBP10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 MRGBPQ9NV56 204 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 PMF1-BGLAPU3KQ54 211 aa10.78□□□□□ -0.68
CTDNEP1-205ENST00000570828 RPL36A-HNRNPH2H7BZ11 118 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 M0QX08 132 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 CHP2O43745 196 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 TPST2O60704 377 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 ICMTO60725 284 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 SASH3O75995 380 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 BGLAPP02818 100 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 C8BP07358 591 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 VIMP08670 466 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 CECR9P0C854 216 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 TROVE2P10155 538 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 SNRPD2P62316 118 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 TUBA1BP68363 451 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 TUBA4AP68366 448 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 ARF1P84077 181 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 POU3F1Q03052 451 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 PUDPQ08623 228 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 PMS2P3Q13401 168 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 DUSP7Q16829 419 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 CEACAM16Q2WEN9 425 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 TRMT5Q32P41 509 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 CARD17Q5XLA6 110 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF613Q6PF04 617 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 TUBA1AQ71U36 451 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 TMEM123Q8N131 208 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 SLC26A7Q8TE54 656 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 HTRA1Q92743 480 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 SLC41A3Q96GZ6 507 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 ARHGDIGQ99819 225 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 WFDC6Q9BQY6 131 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 NELFAQ9H3P2 528 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 CRLF2Q9HC73 371 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 GPR35Q9HC97 309 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 MRPL39Q9NYK5 338 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 NOX1Q9Y5S8 564 aa10.77□□□□□ -0.69
CTDNEP1-205ENST00000570828 IGHV4-30-2A0A087WSY4 118 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 CPSF4LA6NMK7 179 aaKnown RBP10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 M0R3G1 203 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 SERPINI2O75830 405 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 HPRP00739 348 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 MT-ATP6P00846 226 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 AHCYP23526 432 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 CAPZA2P47755 286 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 RELBQ01201 579 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 NAAAQ02083 359 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 CYLC2Q14093 348 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 SWI5Q1ZZU3 235 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 C3orf36Q3SXR2 165 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 ENTPD8Q5MY95 495 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF525Q8N782 197 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 FAM169BQ8N8A8 192 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 GPR32P1Q8NGA4 272 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 OR6T1Q8NGN1 323 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 OR10A6Q8NH74 314 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 MOGAT1Q96PD6 335 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 KRTAP4-8Q9BYQ9 185 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 B3GAT2Q9NPZ5 323 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 CA10Q9NS85 328 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 CRNNQ9UBG3 495 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 FKBP7Q9Y680 259 aa10.76□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF726A6NNF4 738 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 ZNF99A8MXY4 864 aaPredicted RBP10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 LRRN3E7EW58 273 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 MS4A18H0YCH9 400 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 SEC14L2O76054 403 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 OR6A2O95222 327 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 IGKV3-15P01624 115 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 IGLV1-44P01699 117 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 CSF3P09919 207 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 HLA-DOBP13765 273 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 SLC25A16P16260 332 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 CD247P20963 164 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 SERPINF1P36955 418 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 IDH3GP51553 393 aaPredicted RBP10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 EFNA4P52798 201 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 NPRL3Q12980 569 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 NPTX1Q15818 432 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 MS4A18Q3C1V0 323 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 MMEL1Q495T6 779 aa10.75□□□□□ -0.69
CTDNEP1-205ENST00000570828 VHLLQ6RSH7 139 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms