RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 STEAP1Q9UHE8 339 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 IER3IP1Q9Y5U9 82 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 A0A0B4J2E0 115 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 A0A1B0GX12 115 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 PEX12O00623 359 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 ADRA2CP18825 462 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 ACTBP60709 375 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 ACTG1P63261 375 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 NTHL1P78549 312 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 SWI5Q1ZZU3 235 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 C11orf87Q6NUJ2 197 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 STEAP1BQ6NZ63 245 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 ACOT7LQ6ZUV0 252 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 OR5M8Q8NGP6 311 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 OR5AK2Q8NH90 309 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 THAP6Q8TBB0 222 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 GLYATL2Q8WU03 294 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 ZNF707Q96C28 371 aaPredicted RBP14.09□□□□□ -0.15
SMG6-207ENST00000570756 ZNF75AQ96N20 296 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 ZNF558Q96NG5 402 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 MYADMQ96S97 322 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 SLC25A21Q9BQT8 299 aaPredicted RBP14.09□□□□□ -0.15
SMG6-207ENST00000570756 XKR8Q9H6D3 395 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 TM7SF3Q9NS93 570 aa14.09□□□□□ -0.15
SMG6-207ENST00000570756 TMEM82A0PJX8 343 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 IDSB3KWA1 339 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 SNAPINO95295 136 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 BDKRB2P30411 391 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 PRSS3P35030 304 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 BTN3A2P78410 334 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 DCDP81605 110 aaKnown RBP14.08□□□□□ -0.16
SMG6-207ENST00000570756 GUCA2BQ16661 112 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 AVPI1Q5T686 147 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 ERN2Q76MJ5 926 aaKnown RBP14.08□□□□□ -0.16
SMG6-207ENST00000570756 LRRTM1Q86UE6 522 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 CBLN2Q8IUK8 224 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 COX18Q8N8Q8 333 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 OR1S2Q8NGQ3 325 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 OR1J4Q8NGS1 313 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 RBM18Q96H35 190 aaKnown RBP14.08□□□□□ -0.16
SMG6-207ENST00000570756 CHST6Q9GZX3 395 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 WDR13Q9H1Z4 485 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 PRDM9Q9NQV7 894 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 ASF1BQ9NVP2 202 aa14.08□□□□□ -0.16
SMG6-207ENST00000570756 ZNF629Q9UEG4 869 aaPredicted RBP14.08□□□□□ -0.16
SMG6-207ENST00000570756 TP53BP1Q12888 1972 aaPredicted RBP14.08□□□□□ -0.16
SMG6-207ENST00000570756 NUDT19A8MXV4 375 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 RAD1O60671 282 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 CTAG2O75638 210 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 CD3DP04234 171 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 DLSTP36957 453 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 NR0B1P51843 470 aaKnown RBP14.07□□□□□ -0.16
SMG6-207ENST00000570756 SRSF4Q08170 494 aaKnown RBP14.07□□□□□ -0.16
SMG6-207ENST00000570756 FHL1Q13642 323 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 SERTAD2Q14140 314 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 RAB12Q6IQ22 244 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 ADAMTSL4Q6UY14 1074 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 SLC39A11Q8N1S5 342 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 OR4K14Q8NGD5 310 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 OR2L8Q8NGY9 312 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 SFT2D1Q8WV19 159 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 ZFP57Q9NU63 452 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 APOBEC3BQ9UH17 382 aaKnown RBP14.07□□□□□ -0.16
SMG6-207ENST00000570756 CARHSP1Q9Y2V2 147 aaKnown RBP14.07□□□□□ -0.16
SMG6-207ENST00000570756 ZNF337Q9Y3M9 751 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 OR10H1Q9Y4A9 318 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 LINC01387J3KSC0 135 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 SLC25A12O75746 678 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 ZNF432O94892 652 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 ADRB3P13945 408 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 SPI1P17947 270 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 ITGB8P26012 769 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 SOX2P48431 317 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 BLOC1S1P78537 153 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 VWA2Q5GFL6 755 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 C3orf33Q6P1S2 294 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 FAM122BQ7Z309 247 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 BOLLQ8N9W6 283 aaKnown RBP14.07□□□□□ -0.16
SMG6-207ENST00000570756 ZNF417Q8TAU3 575 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 PMM1Q92871 262 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 ARRDC3Q96B67 414 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 ZNF426Q9BUY5 554 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 FKRPQ9H9S5 495 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 IL21RQ9HBE5 538 aa14.07□□□□□ -0.16
SMG6-207ENST00000570756 MYOZ1Q9NP98 299 aaPredicted RBP14.07□□□□□ -0.16
SMG6-207ENST00000570756 ZNF230Q9UIE0 474 aaPredicted RBP14.07□□□□□ -0.16
SMG6-207ENST00000570756 NPIPA5A0A0B4J1W7 369 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 A0A1B0GTI1 187 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 A0A1B0GWA3 101 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 NPIPA7E9PJI5 369 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 PSMD9O00233 223 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 TGM5O43548 720 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 NPIPA8P0DM63 369 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 RPL4P36578 427 aaKnown RBP14.06□□□□□ -0.16
SMG6-207ENST00000570756 TAS2R19P59542 299 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 POLR2GP62487 172 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMG6-207ENST00000570756 ALKBH1Q13686 389 aaKnown RBP14.06□□□□□ -0.16
SMG6-207ENST00000570756 C10orf91Q5T1B1 145 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 MFSD9Q8NBP5 474 aa14.06□□□□□ -0.16
SMG6-207ENST00000570756 CLEC1AQ8NC01 280 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms