RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ZNF14P17017 642 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 LSP1P33241 339 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 ARFIP2P53365 341 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 MVDP53602 400 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 GKAP1Q5VSY0 366 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 SERPINA11Q86U17 422 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 LSMEM1Q8N8F7 131 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 OR6S1Q8NH40 331 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 PKNOX2Q96KN3 472 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 LRRC37BQ96QE4 947 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 SORT1Q99523 831 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 SSU72Q9NP77 194 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 GPR160Q9UJ42 338 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
HERPUD1-215ENST00000568676 M0R082 166 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 TRAF3IP2O43734 574 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ANP32DO95626 131 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 RAB36O95755 333 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 HPXP02790 462 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ALDOCP09972 364 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 CD79AP11912 226 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ETFAP13804 333 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 EGR1P18146 543 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 MYBPC1Q00872 1141 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 FXNQ16595 210 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ZNF311Q5JNZ3 666 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 MSANTD1Q6ZTZ1 278 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 UEVLDQ8IX04 471 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 C20orf196Q8IYI0 205 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ZNF417Q8TAU3 575 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 DNAJA4Q8WW22 397 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ZNF837Q96EG3 531 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 KTI12Q96EK9 354 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 TMEM19Q96HH6 336 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ZNF587Q96SQ5 575 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 TMEM109Q9BVC6 243 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 TPT1P8Q9HAU6 139 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 BCL2L10Q9HD36 194 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 SLC52A3Q9NQ40 469 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 ZNF275Q9NSD4 429 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 SLC7A8Q9UHI5 535 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 CHST2Q9Y4C5 530 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 GPR45Q9Y5Y3 372 aa13.53□□□□□ -0.24
HERPUD1-215ENST00000568676 TRAV36DV7A0A075B6V5 113 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 SLC22A23A1A5C7 686 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 WDR91A4D1P6 747 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 M0R3G1 203 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 UBL3O95164 117 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 HLA-HP01893 362 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 IDO1P14902 403 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 EPHA1P21709 976 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 COL8A2P25067 703 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 IL12AP29459 219 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 GRPRP30550 384 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 NME5P56597 212 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 SELENOVP59797 346 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 FAM91A1Q658Y4 838 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 FAHD2BQ6P2I3 314 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 ZNF813Q6ZN06 617 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 PEG10Q86TG7 708 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 SCAIQ8N9R8 606 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 TAAR8Q969N4 342 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 FAHD2AQ96GK7 314 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 ZNF75AQ96N20 296 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 EPYCQ99645 322 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 SUCNR1Q9BXA5 334 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 RAD21L1Q9H4I0 556 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 POFUT2Q9Y2G5 429 aa13.52□□□□□ -0.25
HERPUD1-215ENST00000568676 DYSFO75923 2080 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 TRPC5OSA6NMA1 111 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 J3QLI3 93 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 PPIHO43447 177 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 NQO1P15559 274 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 ALDH3B1P43353 468 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 LMO4P61968 165 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 RAB1AP62820 205 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 STX3Q13277 289 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 PCGF3Q3KNV8 242 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 ACSM5Q6NUN0 579 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 BBS10Q8TAM1 723 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 RAB39BQ96DA2 213 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 SLC41A3Q96GZ6 507 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 MS4A3Q96HJ5 214 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 ITCHQ96J02 903 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 SYT3Q9BQG1 590 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 LPAR2Q9HBW0 351 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 TREM2Q9NZC2 230 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 SEC14L4Q9UDX3 406 aa13.51□□□□□ -0.25
HERPUD1-215ENST00000568676 A0A087WUJ7 227 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 A0A0G2JMP0 313 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 A0A0X1KG70 313 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 A0A1W2PPW3 197 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 ZNF726A6NNF4 738 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 SDHDO14521 159 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 RP2O75695 350 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 SLC22A3O75751 556 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 SEC14L2O76054 403 aa13.5□□□□□ -0.25
HERPUD1-215ENST00000568676 ETS2P15036 469 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms