RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MVKQ03426 396 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 PIGFQ07326 219 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 ZP4Q12836 540 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 NKPD1Q17RQ9 610 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 AVPI1Q5T686 147 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 RNF220Q5VTB9 566 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 ATG16L1Q676U5 607 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 RBMS3Q6XE24 437 aaKnown RBP10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF627Q7L945 461 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 VRK2Q86Y07 508 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 RNF217Q8TC41 542 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 UBLCP1Q8WVY7 318 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 PPP1R36Q96LQ0 422 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 ZNF75AQ96N20 296 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 CCDC115Q96NT0 180 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 PANX1Q96RD7 426 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 DENND2DQ9H6A0 471 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 AKTIPQ9H8T0 292 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 SEC14L4Q9UDX3 406 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 SLC7A8Q9UHI5 535 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 BTNL2Q9UIR0 455 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 PPIAL4AQ9Y536 164 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 WNK2Q9Y3S1 2297 aa10.09□□□□□ -0.79
GTF3C1-209ENST00000568569 DSPPQ9NZW4 1301 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 LOC102725191A0A1B0GVB3 256 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 CCDC154A6NI56 674 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 M0R082 166 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 TRAF3IP2O43734 574 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 CDC14BO60729 498 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 PRG2P13727 222 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 S100A3P33764 101 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 RAD52P43351 418 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 GIPRP48546 466 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 SELENOVP59797 346 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 TEKQ02763 1124 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 EGR4Q05215 589 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 LARS2Q15031 903 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 CHI3L2Q15782 390 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 PCGF3Q3KNV8 242 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 COX20Q5RI15 118 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF813Q6ZN06 617 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 LRRC34Q8IZ02 419 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF417Q8TAU3 575 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 PNPT1Q8TCS8 783 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 C22orf15Q8WYQ4 148 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 KTI12Q96EK9 354 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 ARMC7Q9H6L4 198 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 C7orf69Q9H7B7 122 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 UNKLQ9H9P5 680 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 ZMAT3Q9HA38 289 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 CACYBPQ9HB71 228 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 B3GAT2Q9NPZ5 323 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 CALML5Q9NZT1 146 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC17A7Q9P2U7 560 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 P2RX2Q9UBL9 471 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 GPR160Q9UJ42 338 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 FBXL3Q9UKT7 428 aa10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF443Q9Y2A4 671 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-209ENST00000568569 C17orf100A8MU93 164 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 CLDN25C9JDP6 229 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 OR2T1O43869 369 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 UBL3O95164 117 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 FSHBP01225 129 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 IGHV2-5P01817 119 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 B4GALT1P15291 398 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 PRTN3P24158 256 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 CRISP3P54108 245 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 RAB1AP62820 205 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 CCL8P80075 99 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 MFSD13AQ14CX5 517 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 MAPK11Q15759 364 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 ALKBH6Q3KRA9 238 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 PHYHD1Q5SRE7 291 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 FAM69AQ5T7M9 428 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 CARD17Q5XLA6 110 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 RGS7BPQ6MZT1 257 aaPredicted RBP10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 TMEM154Q6P9G4 183 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 C5orf46Q6UWT4 87 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF621Q6ZSS3 439 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 H1FNTQ75WM6 255 aaPredicted RBP10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 SERPINA11Q86U17 422 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 SNX32Q86XE0 403 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 TREML1Q86YW5 311 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 C20orf196Q8IYI0 205 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 CLIP4Q8N3C7 705 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 SNX33Q8WV41 574 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 DVL3Q92997 716 aaPredicted RBP10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 TIMD4Q96H15 378 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 LRR1Q96L50 414 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 HINT3Q9NQE9 182 aaKnown RBP10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 ZNF224Q9NZL3 707 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 TAAR3PQ9P1P4 343 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 OPN4Q9UHM6 478 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 POFUT2Q9Y2G5 429 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 WIPI2Q9Y4P8 454 aa10.07□□□□□ -0.8
GTF3C1-209ENST00000568569 VWFP04275 2813 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 IGHV1-69-2A0A0G2JMI3 117 aa10.06□□□□□ -0.8
GTF3C1-209ENST00000568569 SLC22A23A1A5C7 686 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms