RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CMAHPQ9Y471 501 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 PCDHB14Q9Y5E9 798 aa13.38□□□□□ -0.27
NME3-211ENST00000568561 TRAV36DV7A0A075B6V5 113 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 VSTM5A8MXK1 200 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 C5orf58C9J3I9 102 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 FZD7O75084 574 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 B4GALT1P15291 398 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 NQO1P15559 274 aaKnown RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 NR4A1P22736 598 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 POU3F1Q03052 451 aaPredicted RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 MAD2L1BPQ15013 274 aaPredicted RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 GLIPR1L2Q4G1C9 344 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 ZNF813Q6ZN06 617 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 H1FNTQ75WM6 255 aaPredicted RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 UEVLDQ8IX04 471 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 C10orf111Q8N326 155 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 NFKBIDQ8NI38 313 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 GTF2H4Q92759 462 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 SLC38A4Q969I6 547 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 MAELQ96JY0 434 aaKnown RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 BCL2L10Q9HD36 194 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 THAP1Q9NVV9 213 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 MED29Q9NX70 200 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 B3GNT2Q9NY97 397 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 MYEF2Q9P2K5 600 aaKnown RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 FBXO9Q9UK97 447 aaPredicted RBP13.37□□□□□ -0.27
NME3-211ENST00000568561 PRDM4Q9UKN5 801 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 FZR1Q9UM11 496 aa13.37□□□□□ -0.27
NME3-211ENST00000568561 DYSFO75923 2080 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 TMEM120BA0PK00 339 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 LRRN3E7EW58 273 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 MS4A18H0YCH9 400 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 CLIC1O00299 241 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 AKAP8O43823 692 aaKnown RBP13.36□□□□□ -0.27
NME3-211ENST00000568561 OR2T1O43869 369 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 TPST1O60507 370 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 SERPINI2O75830 405 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 RGS9O75916 674 aaPredicted RBP13.36□□□□□ -0.27
NME3-211ENST00000568561 HPXP02790 462 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 ALDH3B1P43353 468 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 SEC24CP53992 1094 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 GSG1Q2KHT4 349 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 MS4A18Q3C1V0 323 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 ALG10BQ5I7T1 473 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 ELFN2Q5R3F8 820 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 MSANTD1Q6ZTZ1 278 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 LRP11Q86VZ4 500 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 C20orf196Q8IYI0 205 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 MRPL24Q96A35 216 aaKnown RBP13.36□□□□□ -0.27
NME3-211ENST00000568561 TXNDC15Q96J42 360 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 MOGAT1Q96PD6 335 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 OCEL1Q9H607 264 aa13.36□□□□□ -0.27
NME3-211ENST00000568561 THUMPD1Q9NXG2 353 aaKnown RBP13.36□□□□□ -0.27
NME3-211ENST00000568561 A0A087WUJ7 227 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 FAM157AC9JC47 383 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 M0R233 179 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 WNT9BO14905 357 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 UBDO15205 165 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 SYNGR3O43761 229 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 ZNF14P17017 642 aaPredicted RBP13.35□□□□□ -0.27
NME3-211ENST00000568561 HOXB9P17482 250 aaPredicted RBP13.35□□□□□ -0.27
NME3-211ENST00000568561 COL8A2P25067 703 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 PRKAR1BP31321 381 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 GIPRP48546 466 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 PTDSS1P48651 473 aaKnown RBP13.35□□□□□ -0.27
NME3-211ENST00000568561 DVL1P1P54792 670 aaPredicted RBP13.35□□□□□ -0.27
NME3-211ENST00000568561 CAMK2DQ13557 499 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 MFSD13AQ14CX5 517 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 MEX3DQ86XN8 651 aaKnown RBP13.35□□□□□ -0.27
NME3-211ENST00000568561 MSRB3Q8IXL7 192 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 MIER2Q8N344 545 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 CLDND2Q8NHS1 167 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 SLC35B4Q969S0 331 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 ZNF75AQ96N20 296 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 WFDC6Q9BQY6 131 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 PARD6BQ9BYG5 372 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 METTL17Q9H7H0 456 aaPredicted RBP13.35□□□□□ -0.27
NME3-211ENST00000568561 C12orf10Q9HB07 376 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 SLC25A37Q9NYZ2 338 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 ZNF224Q9NZL3 707 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 REV1Q9UBZ9 1251 aa13.35□□□□□ -0.27
NME3-211ENST00000568561 NCR1O76036 304 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 VENTXO95231 258 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 BGLAPP02818 100 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 PATE4P0C8F1 98 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 ARAFP10398 606 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 BMP2P12643 396 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 ZNF35P13682 527 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 GPR6P46095 362 aaPredicted RBP13.34□□□□□ -0.27
NME3-211ENST00000568561 FADDQ13158 208 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 TRMT5Q32P41 509 aaKnown RBP13.34□□□□□ -0.27
NME3-211ENST00000568561 GCNT6Q5T4J0 391 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 GLCCI1Q86VQ1 547 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 LSMEM1Q8N8F7 131 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 ADPRHL1Q8NDY3 354 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 IL17RDQ8NFM7 739 aa13.34□□□□□ -0.27
NME3-211ENST00000568561 OR6N1Q8NGY5 312 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms