RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 LSM12Q3MHD2 195 aaKnown RBP9.94□□□□□ -0.82
CLK3-222ENST00000568232 VAX1Q5SQQ9 334 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 FIP1L1Q6UN15 594 aaKnown RBP9.94□□□□□ -0.82
CLK3-222ENST00000568232 SYT10Q6XYQ8 523 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 FRRS1Q6ZNA5 592 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 FRMD7Q6ZUT3 714 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 CCDC36Q8IYA8 594 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 KRTCAP2Q8N6L1 136 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 SPATA4Q8NEY3 305 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 OR52E2Q8NGJ4 325 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 MGARPQ8TDB4 240 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 XAGE5Q8WWM1 108 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 MOAP1Q96BY2 351 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 OR51B6Q9H340 312 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 ZNF224Q9NZL3 707 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 SEC14L4Q9UDX3 406 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 RASD1Q9Y272 281 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 INSIG2Q9Y5U4 225 aa9.94□□□□□ -0.82
CLK3-222ENST00000568232 TENM3Q9P273 2699 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 PRAMEF27A3QJZ7 478 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 G3V2L1 256 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 M0R3G1 203 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 FRS3O43559 492 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 SNRPAP09012 282 aaKnown RBP9.93□□□□□ -0.82
CLK3-222ENST00000568232 PATE4P0C8F1 98 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 ZNF12P17014 697 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 MAP2K6P52564 334 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 GNG11P61952 73 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 RAB1AP62820 205 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 PTGR1Q14914 329 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 RAB39AQ14964 217 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 MMEL1Q495T6 779 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 RGS7BPQ6MZT1 257 aaPredicted RBP9.93□□□□□ -0.82
CLK3-222ENST00000568232 PARP8Q8N3A8 854 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 SNX33Q8WV41 574 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 ROPN1LQ96C74 230 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 ITPKCQ96DU7 683 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 SLC35G5Q96KT7 338 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 PRPF18Q99633 342 aaKnown RBP9.93□□□□□ -0.82
CLK3-222ENST00000568232 MRI1Q9BV20 369 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 GATA5Q9BWX5 397 aaPredicted RBP9.93□□□□□ -0.82
CLK3-222ENST00000568232 FUT8Q9BYC5 575 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 MARCH7Q9H992 704 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 SAP30LQ9HAJ7 183 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 NPHS2Q9NP85 383 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 ZDHHC18Q9NUE0 388 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 EXD2Q9NVH0 621 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 NKIRAS2Q9NYR9 191 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 ZNF180Q9UJW8 692 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 RNF114Q9Y508 228 aa9.93□□□□□ -0.82
CLK3-222ENST00000568232 IGLV3-9A0A075B6K5 115 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 NDUFA7O95182 113 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 IGHMP01871 453 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 CCL2P13500 99 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 ZNF43P17038 809 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
CLK3-222ENST00000568232 GLO1Q04760 184 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 EPS8Q12929 822 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 CHI3L2Q15782 390 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 DEFB112Q30KQ8 113 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 C1orf140Q5VVS0 124 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 CARD17Q5XLA6 110 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 TNFAIP8L2Q6P589 184 aaPredicted RBP9.92□□□□□ -0.82
CLK3-222ENST00000568232 ZNF813Q6ZN06 617 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 C9orf139Q6ZV77 190 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 ZNF584Q8IVC4 421 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 CMIPQ8IY22 773 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 CLECL1Q8IZS7 167 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 PAQR4Q8N4S7 273 aaPredicted RBP9.92□□□□□ -0.82
CLK3-222ENST00000568232 SYNPRQ8TBG9 265 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 SLC25A36Q96CQ1 311 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 COQ8BQ96D53 544 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 OR2M2Q96R28 347 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 NAPGQ99747 312 aaPredicted RBP9.92□□□□□ -0.82
CLK3-222ENST00000568232 CHIAQ9BZP6 476 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 TCF7L1Q9HCS4 588 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 DCAF16Q9NXF7 216 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 B3GAT1Q9P2W7 334 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 EGFL7Q9UHF1 273 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 SLC7A8Q9UHI5 535 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 EMCNQ9ULC0 261 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 RCE1Q9Y256 329 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 TMED5Q9Y3A6 229 aa9.92□□□□□ -0.82
CLK3-222ENST00000568232 RNF103-CHMP3A0A140T963 221 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 CFAP73A6NFT4 308 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 A8MVM7 634 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 SRRM5B3KS81 715 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 RAB36O95755 333 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 PLATP00750 562 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 C1QCP02747 245 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 TFPTP0C1Z6 253 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 GKN3PP0CG01 181 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 OR8G3PP0DMU2 310 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 PNMTP11086 282 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 B4GALT1P15291 398 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 ZNF250P15622 560 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 CD80P33681 288 aa9.91□□□□□ -0.82
CLK3-222ENST00000568232 SELENOVP59797 346 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms