RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 GLRX2Q9NS18 164 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 C20orf96Q9NUD7 363 aaPredicted RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 NUDT15Q9NV35 164 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PAQR5Q9NXK6 330 aaPredicted RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 ACTR3BQ9P1U1 418 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 GALPQ9UBC7 116 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 SPRR3Q9UBC9 169 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 HMGXB4Q9UGU5 601 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 CYTH4Q9UIA0 394 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 LCMT1Q9UIC8 334 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF221Q9UK13 617 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 SNX6Q9UNH7 406 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 AURKCQ9UQB9 309 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PIN4Q9Y237 131 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 EIF3LQ9Y262 564 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 TIMM22Q9Y584 194 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 GMPPBQ9Y5P6 360 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 LRRC37AA6NMS7 1700 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 DDX60Q8IY21 1712 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 PRUNE2Q8WUY3 3088 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 MUC6Q6W4X9 2439 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 WDR19Q8NEZ3 1342 aa2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 LAMA2P24043 3122 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-212ENST00000567944 A0A0U1RQV5 110 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 A0A1B0GWJ7 208 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 GSTTP1A0A1W2PQM5 241 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 WI2-2373I1.2A0A1W2PRP0 233 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 HEATR9A2RTY3 570 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SMCO2A6NFE2 343 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TMEM210A6NLX4 147 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TRPC5OSA6NMA1 111 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 C2orf74A8MZ97 194 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TMEM114B3SHH9 223 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 E9PBE3 544 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 WWP2O00308 870 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 AIM2O14862 343 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CASKO14936 926 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ANGPT2O15123 496 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 BET1O15155 118 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 DENRO43583 198 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 EFNA2O43921 213 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SSX5O60225 188 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 MGRN1O60291 552 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 PEX11AO75192 247 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TRIM3O75382 744 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SUPT3HO75486 399 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CABYRO75952 493 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CRYZL1O95825 349 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 PGK1P00558 417 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ASNSP08243 561 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 GSTT2P0CG29 244 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 GSTT2BP0CG30 244 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 PRPS2P11908 318 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 PRG2P13727 222 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 H2AFXP16104 143 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CCNA2P20248 432 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 PSMB1P20618 241 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CALB2P22676 271 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 GLRA2P23416 452 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 IFNA8P32881 189 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 EPHX2P34913 555 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CYLC1P35663 651 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SPAM1P38567 509 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SLC1A1P43005 524 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 OR3A4PP47883 348 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 EMDP50402 254 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 NOVA1P51513 510 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CARD18P57730 90 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 RND3P61587 244 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 RPL10AP62906 217 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 HTD2P86397 168 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CKAP4Q07065 602 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 EGFEM1PQ0D2K5 195 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SMARCB1Q12824 385 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 FLOT2Q14254 428 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ARHGAP19Q14CB8 494 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ANGPT1Q15389 498 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 LRRC36Q1X8D7 754 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TEX44Q53QW1 395 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SAPCD1Q5SSQ6 148 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CLVS2Q5SYC1 327 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 SPATA46Q5T0L3 261 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ATAD3BQ5T9A4 648 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 FAM173BQ6P4H8 233 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ZNF530Q6P9A1 599 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 IL34Q6ZMJ4 242 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 BZW1Q7L1Q6 419 aaKnown RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 MOB1BQ7L9L4 216 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 LHFPL4Q7Z7J7 247 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CDR2LQ86X02 465 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 C17orf82Q86X59 251 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CDH26Q8IXH8 852 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TTC5Q8N0Z6 440 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 BBS5Q8N3I7 341 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 HDDC3Q8N4P3 179 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CERS5Q8N5B7 392 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 TTC29Q8NA56 475 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 OR52B4Q8NGK2 314 aa2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 CCDC12Q8WUD4 166 aaPredicted RBP2.6□□□□□ -1.99
HERPUD1-212ENST00000567944 ASZ1Q8WWH4 475 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms