RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 OR2M2Q96R28 347 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 MCHR1Q99705 422 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 SH3GL1Q99961 368 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 KCNS3Q9BQ31 491 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 WFDC6Q9BQY6 131 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 KATNB1Q9BVA0 655 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 C1QTNF6Q9BXI9 259 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 TMEM120AQ9BXJ8 343 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 ASPNQ9BXN1 380 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 CACNG6Q9BXT2 260 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 PCDHAC1Q9H158 963 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 GPR35Q9HC97 309 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 MRPL39Q9NYK5 338 aaKnown RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 CRNNQ9UBG3 495 aaPredicted RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 SEC14L4Q9UDX3 406 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 GDF2Q9UK05 429 aaPredicted RBP4.18□□□□□ -1.74
CLK3-219ENST00000567805 ARFGEF3Q5TH69 2177 aa4.18□□□□□ -1.74
CLK3-219ENST00000567805 A0A096LPE4 126 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 A0A1W2PPZ6 126 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 TRAPPC13A5PLN9 417 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CPSF4LA6NMK7 179 aaKnown RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 ZNF99A8MXY4 864 aaPredicted RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 ATP6V1G2-DDX39BF2Z307 99 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 MS4A18H0YCH9 400 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 H7C417 338 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 M0QX08 132 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 M0R3H8 397 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 FXYD1O00168 92 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 FBP2O00757 339 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 PLPP3O14495 311 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 MRASO14807 208 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 LILRA1O75019 489 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 NDUFS7O75251 213 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 IGKV3-15P01624 115 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 IGLV1-44P01699 117 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CRYAAP02489 173 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 OPN1SWP03999 348 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CD247P20963 164 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CBLP22681 906 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 APOBEC3AP31941 199 aaPredicted RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 GZMMP51124 257 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 ARFIP2P53365 341 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 NUDT6P53370 316 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 DSCR9P59020 149 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 PPP2R2BQ00005 443 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 POU3F1Q03052 451 aaPredicted RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 CHRNB3Q05901 458 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 KLF10Q13118 480 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 PMS2P3Q13401 168 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 RAB35Q15286 201 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 NPTX1Q15818 432 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CEACAM16Q2WEN9 425 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 MS4A18Q3C1V0 323 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 MMEL1Q495T6 779 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 ENTPD8Q5MY95 495 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 REP15Q6BDI9 236 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 NANOGP8Q6NSW7 305 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 ERICH5Q6P6B1 374 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 TTC33Q6PID6 262 aaPredicted RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 CLEC2AQ6UVW9 174 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 LINC00114Q6XXX2 140 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CCDC80Q76M96 950 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 SNX32Q86XE0 403 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CALHM3Q86XJ0 350 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CCDC36Q8IYA8 594 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 C20orf196Q8IYI0 205 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 TMEM123Q8N131 208 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 C10orf53Q8N6V4 93 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 PCYOX1LQ8NBM8 494 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 IL17RDQ8NFM7 739 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 GPR32P1Q8NGA4 272 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 OR4F15Q8NGB8 312 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 OR8J3Q8NGG0 315 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 OR5J2Q8NH18 312 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 VANGL1Q8TAA9 524 aaPredicted RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 SLC26A7Q8TE54 656 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 ADAMTS16Q8TE57 1224 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 TAMM41Q96BW9 452 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 LRRC58Q96CX6 371 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 MPP4Q96JB8 637 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 LRR1Q96L50 414 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 ECSITQ9BQ95 431 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 RHNO1Q9BSD3 238 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 ZNF426Q9BUY5 554 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 REG4Q9BYZ8 158 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 SLC19A3Q9BZV2 496 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 POLR2J2Q9GZM3 115 aaKnown RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 POLR2J3Q9H1A7 115 aaKnown RBP4.17□□□□□ -1.74
CLK3-219ENST00000567805 NELFAQ9H3P2 528 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CCDC134Q9H6E4 229 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 NANOGQ9H9S0 305 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CRLF2Q9HC73 371 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 B3GAT2Q9NPZ5 323 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 SAR1AQ9NR31 198 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 NANSQ9NR45 359 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 CA10Q9NS85 328 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 FGFR1OP2Q9NVK5 253 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 GID8Q9NWU2 228 aa4.17□□□□□ -1.74
CLK3-219ENST00000567805 FBXO9Q9UK97 447 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms