RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 RCE1Q9Y256 329 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 CORINQ9Y5Q5 1042 aa6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF469Q96JG9 3925 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-209ENST00000567635 ARPC4-TTLL3A0A0A6YYG9 625 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 LOC100653049A0A140TA62 436 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 TRAPPC13A5PLN9 417 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 CPSF4LA6NMK7 179 aaKnown RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 BBIP1A8MTZ0 92 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 M0R3H8 397 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 PLPP3O14495 311 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MRASO14807 208 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 CHP2O43745 196 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 AKAP8O43823 692 aaKnown RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 SNX3O60493 162 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 KRT34O76011 436 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 HPRP00739 348 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MT-ATP6P00846 226 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 IFNA14P01570 189 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 OPN1SWP03999 348 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 HIST1H2ABP04908 130 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 HEXAP06865 529 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 NQO1P15559 274 aaKnown RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 CD247P20963 164 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 PTNP21246 168 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 APOBEC3AP31941 199 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 ACVR1BP36896 505 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 SLC25A3Q00325 362 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 CHRNB3Q05901 458 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 SPOCK1Q08629 439 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 SF3A3Q12874 501 aaKnown RBP eCLIP6.04□□□□□ -1.442e-7■■■□□ 16.9
SF3B3-209ENST00000567635 RAB35Q15286 201 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MAPRE2Q15555 327 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 C3orf36Q3SXR2 165 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 TBRG1Q3YBR2 411 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 RABL3Q5HYI8 236 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 COQ5Q5HYK3 327 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF544Q6NX49 715 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 TTC33Q6PID6 262 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 NHLRC1Q6VVB1 395 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 HIST3H2AQ7L7L0 130 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 PXKQ7Z7A4 578 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 CALHM3Q86XJ0 350 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 RBM45Q8IUH3 476 aaKnown RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 UEVLDQ8IX04 471 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MUC15Q8N387 334 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 FAM169BQ8N8A8 192 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 ANKS4BQ8N8V4 417 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 SCAIQ8N9R8 606 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 PCYOX1LQ8NBM8 494 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 PIK3C3Q8NEB9 887 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 OR8J3Q8NGG0 315 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MAGEE2Q8TD90 523 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 PROX1Q92786 737 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 HIST1H2ACQ93077 130 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 TAMM41Q96BW9 452 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 TXNDC15Q96J42 360 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 LRR1Q96L50 414 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 ADAD1Q96M93 576 aaKnown RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 HS6ST2Q96MM7 605 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MOGAT1Q96PD6 335 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 OR2M2Q96R28 347 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 KCNS3Q9BQ31 491 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 BARX1Q9HBU1 254 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 CRLF2Q9HC73 371 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MOV10Q9HCE1 1003 aaKnown RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 B3GAT2Q9NPZ5 323 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 CBLN4Q9NTU7 201 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 ETAA1Q9NY74 926 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MRPL39Q9NYK5 338 aaKnown RBP6.04□□□□□ -1.44
SF3B3-209ENST00000567635 MOKQ9UQ07 419 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 NOX1Q9Y5S8 564 aa6.04□□□□□ -1.44
SF3B3-209ENST00000567635 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.03□□□□□ -1.445e-7■■■■■ 38.1
SF3B3-209ENST00000567635 A0A096LPE4 126 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 IGHV1-18A0A0C4DH31 117 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 A0A1W2PPZ6 126 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 SLC35F4A4IF30 521 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 ZNF726A6NNF4 738 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 RNF223E7ERA6 249 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 C3orf80F5H4A9 247 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 M0R3G1 203 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 FXYD1O00168 92 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 SLC22A2O15244 555 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 TRAF3IP2O43734 574 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-209ENST00000567635 SSX4O60224 188 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 NDUFS7O75251 213 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 OR6A2O95222 327 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 LYPD3O95274 346 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 CH25HO95992 272 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 IGHV4-39P01824 125 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 CRYAAP02489 173 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 BMP4P12644 408 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 HLA-DOBP13765 273 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 CBR1P16152 277 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 AHCYP23526 432 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 CRYBA2P53672 197 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 PUDPQ08623 228 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 ZP4Q12836 540 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 VEZF1Q14119 521 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 NPTX1Q15818 432 aa6.03□□□□□ -1.44
SF3B3-209ENST00000567635 CEACAM16Q2WEN9 425 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms