RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 M0R3G1 203 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 M0R3H8 397 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 PDE5AO76074 875 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 OPN1SWP03999 348 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 OR4A8P0C604 315 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 NQO1P15559 274 aaKnown RBP15.89■□□□□ 0.13
USB1-213ENST00000566292 IDH3GP51553 393 aaPredicted RBP15.89■□□□□ 0.13
USB1-213ENST00000566292 MTPNP58546 118 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 NPTX1Q15818 432 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 DUSP7Q16829 419 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 CARD17Q5XLA6 110 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 CXXC5Q7LFL8 322 aaKnown RBP15.89■□□□□ 0.13
USB1-213ENST00000566292 RANBP3LQ86VV4 465 aaPredicted RBP15.89■□□□□ 0.13
USB1-213ENST00000566292 C20orf196Q8IYI0 205 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 ANKS4BQ8N8V4 417 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 SCAIQ8N9R8 606 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 C11orf65Q8NCR3 313 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 GPR32P1Q8NGA4 272 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 OR4F15Q8NGB8 312 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 TXNDC15Q96J42 360 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 ANKRD27Q96NW4 1050 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 CGREF1Q99674 301 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 ARHGDIGQ99819 225 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 TMEM43Q9BTV4 400 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 EVA1AQ9H8M9 152 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 MOV10Q9HCE1 1003 aaKnown RBP15.89■□□□□ 0.13
USB1-213ENST00000566292 MED29Q9NX70 200 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 MRPL39Q9NYK5 338 aaKnown RBP15.89■□□□□ 0.13
USB1-213ENST00000566292 NDUFAF1Q9Y375 327 aa15.89■□□□□ 0.13
USB1-213ENST00000566292 IGHV2OR16-5A0A0B4J2B6 119 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 ZNF99A8MXY4 864 aaPredicted RBP15.88■□□□□ 0.13
USB1-213ENST00000566292 HMGB1P1B2RPK0 211 aaPredicted RBP15.88■□□□□ 0.13
USB1-213ENST00000566292 M0QX08 132 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 PDLIM4P50479 330 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 POU3F1Q03052 451 aaPredicted RBP15.88■□□□□ 0.13
USB1-213ENST00000566292 RBBP4Q09028 425 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 EFNB3Q15768 340 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 CYP51A1Q16850 503 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 SWT1Q5T5J6 900 aaKnown RBP15.88■□□□□ 0.13
USB1-213ENST00000566292 LINC00114Q6XXX2 140 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 SLC46A3Q7Z3Q1 461 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 MDP1Q86V88 176 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 NUP37Q8NFH4 326 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 MCHR1Q99705 422 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 VRK1Q99986 396 aaPredicted RBP15.88■□□□□ 0.13
USB1-213ENST00000566292 ASPNQ9BXN1 380 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 PLK3Q9H4B4 646 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 FKBP7Q9Y680 259 aa15.88■□□□□ 0.13
USB1-213ENST00000566292 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.87■□□□□ 0.135e-11■■□□□ 11.9
USB1-213ENST00000566292 SLC35F4A4IF30 521 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 PLPP3O14495 311 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 FMO6PO60774 539 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 THY1P04216 161 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 IGHV4-31P0DP07 118 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 USF1P22415 310 aaPredicted RBP15.87■□□□□ 0.13
USB1-213ENST00000566292 THBS4P35443 961 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 PUDPQ08623 228 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 NPRL3Q12980 569 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 PMS2P3Q13401 168 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 CAMK2DQ13557 499 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 CHRFAM7AQ494W8 412 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 ZNF613Q6PF04 617 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 WDR88Q6ZMY6 472 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 OR4D11Q8NGI4 311 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 OR6T1Q8NGN1 323 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 LRR1Q96L50 414 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 ZNF442Q9H7R0 627 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 NOX3Q9HBY0 568 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 NPHS2Q9NP85 383 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 B3GNT2Q9NY97 397 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 NOX1Q9Y5S8 564 aa15.87■□□□□ 0.13
USB1-213ENST00000566292 ANGPT2O15123 496 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 CHP2O43745 196 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 EDF1O60869 148 aaKnown RBP15.86■□□□□ 0.13
USB1-213ENST00000566292 LYPD3O95274 346 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 ZNF16P17020 682 aaPredicted RBP15.86■□□□□ 0.13
USB1-213ENST00000566292 CD247P20963 164 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 ARR3P36575 388 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 CAPZA2P47755 286 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 PPOXP50336 477 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 LSM11P83369 360 aaKnown RBP eCLIP15.86■□□□□ 0.131e-9■■■■■ 34.8
USB1-213ENST00000566292 TSPYL5Q86VY4 417 aaPredicted RBP15.86■□□□□ 0.13
USB1-213ENST00000566292 RBM45Q8IUH3 476 aaKnown RBP15.86■□□□□ 0.13
USB1-213ENST00000566292 CCDC36Q8IYA8 594 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 C10orf53Q8N6V4 93 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 KAT8Q9H7Z6 458 aaKnown RBP15.86■□□□□ 0.13
USB1-213ENST00000566292 USP22Q9UPT9 525 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 SVEP1Q4LDE5 3571 aa15.86■□□□□ 0.13
USB1-213ENST00000566292 TMEM129A0AVI4 362 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 CPSF4LA6NMK7 179 aaKnown RBP15.85■□□□□ 0.13
USB1-213ENST00000566292 hCG_2039718K7EN88 272 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 NDUFS8O00217 210 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 HLA-HP01893 362 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 C8BP07358 591 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 NR4A2P43354 598 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 NFYCQ13952 458 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 GGTLC2Q14390 218 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 ENTPD8Q5MY95 495 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 CYB5R2Q6BCY4 276 aa15.85■□□□□ 0.13
USB1-213ENST00000566292 PODNL1Q6PEZ8 512 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms