RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 HEATR5AQ86XA9 2040 aa6.94□□□□□ -1.3
CDH1-208ENST00000565810 USP24Q9UPU5 2620 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 IGKV3D-15A0A087WSY6 115 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 LOC100130705A0A1B0GUX0 176 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 NPIPB13A6NJU9 1138 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 OR6C65A6NJZ3 312 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 ZNF716A6NP11 495 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 HSPB2A8KAH6 182 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 NPIPB4C9JG80 1138 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 ARPC3O15145 178 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 RAMP1O60894 148 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 SS18L1O75177 396 aaPredicted RBP6.93□□□□□ -1.3
CDH1-208ENST00000565810 PPP1R3DO95685 299 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 SNAP29O95721 258 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 IGHG1P01857 330 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 IGHMP01871 453 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 CRHP06850 196 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 IGFBP1P08833 259 aaPredicted RBP6.93□□□□□ -1.3
CDH1-208ENST00000565810 STSP08842 583 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 TMIGD3P0DMS9 266 aaPredicted RBP6.93□□□□□ -1.3
CDH1-208ENST00000565810 GLI4P10075 376 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 NR2C1P13056 603 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 HLA-DOBP13765 273 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 KLK2P20151 261 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 SDHAP31040 664 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 ACVR1BP36896 505 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 CLDN17P56750 224 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 CDC42P60953 191 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 PMPCAQ10713 525 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 MRPL49Q13405 166 aaKnown RBP6.93□□□□□ -1.3
CDH1-208ENST00000565810 FHL1Q13642 323 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 PTGES3Q15185 160 aaKnown RBP6.93□□□□□ -1.3
CDH1-208ENST00000565810 HSPB2Q16082 182 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 IGFBP7Q16270 282 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 SNAPC1Q16533 368 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 ACKR1Q16570 336 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 PGGHGQ32M88 737 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 RIPPLY2Q5TAB7 128 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 RTL6Q6ICC9 239 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 MTFR2Q6P444 385 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 NIPAL3Q6P499 406 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 PLXDC2Q6UX71 529 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 IZUMO2Q6UXV1 221 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 C3P1Q6ZMU1 363 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 FAM214BQ7L5A3 538 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 AAED1Q7RTV5 226 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 JAZF1Q86VZ6 243 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 TUSC5Q8IXB3 177 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 DEPDC4Q8N2C3 294 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 LNX2Q8N448 690 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 ARIH2OSQ8N7S6 290 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 CNEP1R1Q8N9A8 125 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 LRRC75AQ8NAA5 344 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 C9orf106Q8NAJ2 232 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 OR6X1Q8NH79 312 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 PRR7Q8TB68 274 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 FNDC8Q8TC99 324 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 CYGBQ8WWM9 190 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 RND1Q92730 232 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 TMEM45BQ96B21 275 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 ZNF775Q96BV0 537 aaPredicted RBP6.93□□□□□ -1.3
CDH1-208ENST00000565810 INTS12Q96CB8 462 aaKnown RBP6.93□□□□□ -1.3
CDH1-208ENST00000565810 TTYH2Q9BSA4 534 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 PLA2G12AQ9BZM1 189 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 BCO1Q9HAY6 547 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 SLC25A19Q9HC21 320 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 NRIP3Q9NQ35 241 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 TVP23BQ9NYZ1 205 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 KLHL21Q9UJP4 597 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 CLEC4AQ9UMR7 237 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 RCE1Q9Y256 329 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 FAM215AQ9Y5M1 114 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 GMPPBQ9Y5P6 360 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 FLVCR1Q9Y5Y0 555 aa6.93□□□□□ -1.3
CDH1-208ENST00000565810 TLN1Q9Y490 2541 aaKnown RBP6.92□□□□□ -1.3
CDH1-208ENST00000565810 EML6Q6ZMW3 1958 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 TEX13CA0A0J9YWL9 993 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 SLC35F4A4IF30 521 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 ZAR1LA6NP61 321 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 CENPBD1B2RD01 187 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 H0YAE9 185 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 M0R3G1 203 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 CCL21O00585 134 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 BHLHE40O14503 412 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 SLC16A6O15403 523 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 ARHGEF9O43307 516 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 TRAF3IP2O43734 574 aaPredicted RBP6.92□□□□□ -1.3
CDH1-208ENST00000565810 SLC43A1O75387 559 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 KRT33AO76009 404 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 TXNDC12O95881 172 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 RENP00797 406 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 TP53P04637 393 aaPredicted RBP6.92□□□□□ -1.3
CDH1-208ENST00000565810 ZNF3P17036 446 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 PAICSP22234 425 aaKnown RBP6.92□□□□□ -1.3
CDH1-208ENST00000565810 CTSSP25774 331 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 AGTR1P30556 359 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 GRK5P34947 590 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 OPRM1P35372 400 aa6.92□□□□□ -1.3
CDH1-208ENST00000565810 POLR2IP36954 125 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms