RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ZNF540Q8NDQ6 660 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 OR6S1Q8NH40 331 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 VANGL1Q8TAA9 524 aaPredicted RBP5.57□□□□□ -1.52
TCF4-228ENST00000565393 CKAP2Q8WWK9 683 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 MAGEB18Q96M61 343 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 ANKRD27Q96NW4 1050 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 MOGAT1Q96PD6 335 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 SORCS2Q96PQ0 1159 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 CGREF1Q99674 301 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 WFDC6Q9BQY6 131 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 PIMREGQ9BSJ6 248 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 ULBP2Q9BZM5 246 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 SHARPINQ9H0F6 387 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 IKZF5Q9H5V7 419 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 RNF121Q9H920 327 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 SEC61A2Q9H9S3 476 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 DYNLRB1Q9NP97 96 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 MED29Q9NX70 200 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 MRPL39Q9NYK5 338 aaKnown RBP5.57□□□□□ -1.52
TCF4-228ENST00000565393 KLHL14Q9P2G3 628 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 B3GAT1Q9P2W7 334 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 CRNNQ9UBG3 495 aaPredicted RBP5.57□□□□□ -1.52
TCF4-228ENST00000565393 TESQ9UGI8 421 aaKnown RBP5.57□□□□□ -1.52
TCF4-228ENST00000565393 FBXO9Q9UK97 447 aaPredicted RBP5.57□□□□□ -1.52
TCF4-228ENST00000565393 USP22Q9UPT9 525 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 CMAHPQ9Y471 501 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 SPEF1Q9Y4P9 236 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 PCNX3Q9H6A9 2034 aa5.57□□□□□ -1.52
TCF4-228ENST00000565393 SPG11Q96JI7 2443 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 ANKRD17O75179 2603 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 TRBV5-3A0A0A0MS03 114 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 IGHV2OR16-5A0A0B4J2B6 119 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 A0A0B4J2E0 115 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 A0A1B0GX12 115 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 CPSF4LA6NMK7 179 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 BLOC1S5-TXNDC5H3BN57 136 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 NDUFS8O00217 210 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 KPNA4O00629 521 aaPredicted RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 MT-ATP6P00846 226 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 TGFAP01135 160 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 IGKV3-15P01624 115 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 IGLV1-44P01699 117 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 BGLAPP02818 100 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 VIMP08670 466 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 IGHV4-31P0DP07 118 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 UMPSP11172 480 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 APEHP13798 732 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 IFNGR1P15260 489 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 CD247P20963 164 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 NR4A2P43354 598 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 PTDSS1P48651 473 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 CSNK1A1P48729 337 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 GZMKP49863 264 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 BIDP55957 195 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 GALK2Q01415 458 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 PUDPQ08623 228 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 SELPLGQ14242 412 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 MMEL1Q495T6 779 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 ENTPD8Q5MY95 495 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 C6orf52Q5T4I8 152 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 GKAP1Q5VSY0 366 aaPredicted RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 METTL21CQ5VZV1 264 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 ZNF613Q6PF04 617 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 CXXC5Q7LFL8 322 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 PXKQ7Z7A4 578 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 DHDDSQ86SQ9 333 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 PATL1Q86TB9 770 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 RBM45Q8IUH3 476 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 SLC30A8Q8IWU4 369 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 TMEM123Q8N131 208 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 ZCCHC24Q8N2G6 241 aaKnown RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 SVOPLQ8N434 492 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 LRRC17Q8N6Y2 441 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 ARIH2OSQ8N7S6 290 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 SCAIQ8N9R8 606 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 NUP37Q8NFH4 326 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 OR6T1Q8NGN1 323 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 OR5J2Q8NH18 312 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 OR10A6Q8NH74 314 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 SPATA3Q8NHX4 192 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 NEU4Q8WWR8 484 aaPredicted RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 TMEM158Q8WZ71 300 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 SLC41A3Q96GZ6 507 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 LRR1Q96L50 414 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 DOK1Q99704 481 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 SH3GL1Q99961 368 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 ECSITQ9BQ95 431 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 CPPED1Q9BRF8 314 aaPredicted RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 TMEM43Q9BTV4 400 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 NELFAQ9H3P2 528 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 PLK3Q9H4B4 646 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 CHODLQ9H9P2 273 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 MYOZ1Q9NP98 299 aaPredicted RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 NANSQ9NR45 359 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 ARGLU1Q9NWB6 273 aaPredicted RBP5.56□□□□□ -1.52
TCF4-228ENST00000565393 REV1Q9UBZ9 1251 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 DUSP13Q9UII6 198 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 CDC42EP3Q9UKI2 254 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 SLC7A7Q9UM01 511 aa5.56□□□□□ -1.52
TCF4-228ENST00000565393 SH3GLB1Q9Y371 365 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms