RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ITGB8P26012 769 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ACTA2P62736 377 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ACTG2P63267 376 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 UBE2IP63279 158 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 RBMS2Q15434 407 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF77Q15935 545 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NKPD1Q17RQ9 610 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 HNRNPA1L2Q32P51 320 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 LIPNQ5VXI9 398 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DND1Q8IYX4 353 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TSNAXQ99598 290 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SLC6A17Q9H1V8 727 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 MRPS23Q9Y3D9 190 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PRAMEF2O60811 474 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CTNSO60931 367 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 EML2O95834 649 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 F13BP05160 661 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SPI1P17947 270 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 GUCA2BQ16661 112 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ARHGAP11AQ6P4F7 1023 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 LEG1Q6P5S2 330 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NUDT18Q6ZVK8 323 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SLC36A1Q7Z2H8 476 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 USB1Q9BQ65 265 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PLEKHA6Q9Y2H5 1048 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF175Q9Y473 711 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TUBAL3A6NHL2 446 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SLC31A1O15431 190 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NDUFA2O43678 99 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 FGF17O60258 216 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 RNGTTO60942 597 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ITGA10O75578 1167 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 HSD17B2P37059 387 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DHODHQ02127 395 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TMEM205Q6UW68 189 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 RNF113BQ8IZP6 322 aaKnown RBP18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 BEST3Q8N1M1 668 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 TMEM106AQ96A25 262 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 COX14Q96I36 57 aa18.72■□□□□ 0.59
MAP1LC3B-206ENST00000564844 FOSL1P15407 271 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PPM1FP49593 454 aaPredicted RBP18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 EPHA4P54764 986 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ELAVL3Q14576 367 aaKnown RBP18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 DEFB115Q30KQ5 88 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 HSD17B13Q7Z5P4 300 aaPredicted RBP18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 FGF13Q92913 245 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 NKD1Q969G9 470 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF350Q9GZX5 532 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 SLC6A15Q9H2J7 730 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PLEKHA1Q9HB21 404 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CREBZFQ9NS37 354 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ASF1BQ9NVP2 202 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 GLS2Q9UI32 602 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF337Q9Y3M9 751 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 H7C2Y5 167 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 PVRP15151 417 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 CENPAP49450 140 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 FHL1Q13642 323 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 UBXN2BQ14CS0 331 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 LRRC69Q6ZNQ3 347 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF676Q8N7Q3 588 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 ZNF764Q96H86 408 aaPredicted RBP18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 EMC3Q9P0I2 261 aa18.71■□□□□ 0.59
MAP1LC3B-206ENST00000564844 LDOC1O95751 146 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 GLAP06280 429 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 LAG3P18627 525 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 HTRA4P83105 476 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 TNFRSF17Q02223 184 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 POMZP3Q6PJE2 187 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 KIRREL2Q6UWL6 708 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ZNF627Q7L945 461 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 BIVMQ86UB2 503 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OR5AK2Q8NH90 309 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 LCN9Q8WX39 176 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 RSPRY1Q96DX4 576 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 PELOQ9BRX2 385 aaKnown RBP18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 SNRPGP15A8MWD9 76 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 DCTN6O00399 190 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 TYRP1P17643 537 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 TM4SF4P48230 202 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 CCR4P51679 360 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OR7A5Q15622 319 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OR10K2Q6IF99 312 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 LILRA6Q6PI73 481 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 SUSD6Q92537 303 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 MIB2Q96AX9 1013 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 CPNE2Q96FN4 548 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 SLITRK2Q9H156 845 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 FRRS1LQ9P0K9 344 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 PRELID3BQ9Y3B1 194 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OR6C65A6NJZ3 312 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 DGAT2L6Q6ZPD8 337 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 PLPP7Q8NBV4 271 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 TINAGL1Q9GZM7 467 aaPredicted RBP18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 CHRNA9Q9UGM1 479 aa18.7■□□□□ 0.58
MAP1LC3B-206ENST00000564844 LILRB3O75022 631 aa18.69■□□□□ 0.58
MAP1LC3B-206ENST00000564844 GLSO94925 669 aaPredicted RBP18.69■□□□□ 0.58
MAP1LC3B-206ENST00000564844 NDUFB2O95178 105 aa18.69■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OLFML2AQ68BL7 652 aa18.69■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OR1S2Q8NGQ3 325 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms