RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KANTRA0A1W2PQU2 76 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 POM121BA6NF01 834 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 CACNB4O00305 520 aaPredicted RBP14.89□□□□□ -0.03
LINC00554-201ENST00000564841 S100A9P06702 114 aaKnown RBP14.89□□□□□ -0.03
LINC00554-201ENST00000564841 ANXA2P07355 339 aaKnown RBP14.89□□□□□ -0.03
LINC00554-201ENST00000564841 RNF224P0DH78 156 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 UBE3DQ7Z6J8 389 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 SMIM19Q96E16 107 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 WDR34Q96EX3 536 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 OR7D2Q96RA2 312 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 ARHGDIGQ99819 225 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 ZDHHC5Q9C0B5 715 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 PIGMQ9H3S5 423 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 KLHL31Q9H511 634 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 BCL2L10Q9HD36 194 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 PRMT8Q9NR22 394 aaPredicted RBP14.89□□□□□ -0.03
LINC00554-201ENST00000564841 ZFP57Q9NU63 452 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 CPED1A4D0V7 1026 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 IFNA4P05014 189 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 FCARP24071 287 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 KHKP50053 298 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 SIRPAP78324 504 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 BAIAP2L2Q6UXY1 529 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 USP53Q70EK8 1073 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 NAA40Q86UY6 237 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 TEX19Q8NA77 164 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 OR52L1Q8NGH7 329 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 CAMK1GQ96NX5 476 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 ZNF346Q9UL40 294 aaKnown RBP14.89□□□□□ -0.03
LINC00554-201ENST00000564841 ATG4BQ9Y4P1 393 aa14.89□□□□□ -0.03
LINC00554-201ENST00000564841 NPIPA5A0A0B4J1W7 369 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 PMS2P1A4D2B8 440 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 OR5H14A6NHG9 310 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 FAM171A2A8MVW0 826 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 NPIPA7E9PJI5 369 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 CD3DP04234 171 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 NPIPA8P0DM63 369 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 MC3RP41968 323 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 TRAM1Q15629 374 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 ODF4Q2M2E3 257 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 NDUFAF6Q330K2 333 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 FAM129CQ86XR2 697 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 ZSCAN1Q8NBB4 408 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 MS4A8Q9BY19 250 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 POFUT1Q9H488 388 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 CACYBPQ9HB71 228 aaKnown RBP14.88□□□□□ -0.03
LINC00554-201ENST00000564841 FRKP42685 505 aaPredicted RBP14.88□□□□□ -0.03
LINC00554-201ENST00000564841 EFNB2P52799 333 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 DCDP81605 110 aaKnown RBP14.88□□□□□ -0.03
LINC00554-201ENST00000564841 CORO6Q6QEF8 472 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 NUDT18Q6ZVK8 323 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 FAM219AQ8IW50 185 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 TFGQ92734 400 aaPredicted RBP14.88□□□□□ -0.03
LINC00554-201ENST00000564841 TIFAQ96CG3 184 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 CNRIP1Q96F85 164 aaPredicted RBP14.88□□□□□ -0.03
LINC00554-201ENST00000564841 CD180Q99467 661 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 UTP23Q9BRU9 249 aaKnown RBP14.88□□□□□ -0.03
LINC00554-201ENST00000564841 AHSPQ9NZD4 102 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 MSRAQ9UJ68 235 aa14.88□□□□□ -0.03
LINC00554-201ENST00000564841 RPH3AQ9Y2J0 694 aaPredicted RBP14.88□□□□□ -0.03
LINC00554-201ENST00000564841 A0A1B0GTH9 108 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 A0A1B0GW55 424 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 SLC22A31A6NKX4 558 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 FAM25EA8MYX2 175 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 F5H0A9 414 aaPredicted RBP14.87□□□□□ -0.03
LINC00554-201ENST00000564841 ACOT7O00154 380 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DUX4L2P0CJ85 424 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DUX4L3P0CJ86 424 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DUX4L4P0CJ87 422 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DUX4L5P0CJ88 424 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DUX4L6P0CJ89 424 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DUX4L7P0CJ90 424 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 GTF2F2P13984 249 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 RORAP35398 523 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 ZNF793Q6ZN11 406 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 OR4A4PQ8NGN8 299 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 SNX33Q8WV41 574 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 HS6ST2Q96MM7 605 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 ZNF285Q96NJ3 590 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DUX4Q9UBX2 424 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 RNF222A6NCQ9 220 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 GNB5O14775 395 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 RPP14O95059 124 aaKnown RBP14.87□□□□□ -0.03
LINC00554-201ENST00000564841 ST6GAL1P15907 406 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 TAS2R38P59533 333 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 TAS2R43P59537 309 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 NANOS3P60323 173 aaKnown RBP14.87□□□□□ -0.03
LINC00554-201ENST00000564841 OVCH1Q7RTY7 1134 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 DMBX1Q8NFW5 382 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 OR4K13Q8NH42 304 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 PRSS27Q9BQR3 290 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 GPN3Q9UHW5 284 aaPredicted RBP14.87□□□□□ -0.03
LINC00554-201ENST00000564841 LOC100509620A0A075B734 347 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 SELLP14151 372 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 ADRA2CP18825 462 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 ATP1B3P54709 279 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 HYAL1Q12794 435 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 SMCO1Q147U7 214 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 RTL10Q7L3V2 364 aa14.87□□□□□ -0.03
LINC00554-201ENST00000564841 C17orf64Q86WR6 236 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms