RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 OXGR1Q96P68 337 aa16.11■□□□□ 0.17
CLN6-204ENST00000564752 ECSITQ9BQ95 431 aa16.11■□□□□ 0.17
CLN6-204ENST00000564752 RCE1Q9Y256 329 aa16.11■□□□□ 0.17
CLN6-204ENST00000564752 CORINQ9Y5Q5 1042 aa16.11■□□□□ 0.17
CLN6-204ENST00000564752 HEATR1Q9H583 2144 aaKnown RBP16.1■□□□□ 0.17
CLN6-204ENST00000564752 IGHV1-18A0A0C4DH31 117 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 CPSF4LA6NMK7 179 aaKnown RBP16.1■□□□□ 0.17
CLN6-204ENST00000564752 RNF212BA8MTL3 300 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 CHP2O43745 196 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 AKAP8O43823 692 aaKnown RBP16.1■□□□□ 0.17
CLN6-204ENST00000564752 NPPAP01160 153 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 CSF3P09919 207 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 CD247P20963 164 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 PAX7P23759 505 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 MDH1P40925 334 aaKnown RBP16.1■□□□□ 0.17
CLN6-204ENST00000564752 GZMMP51124 257 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 NPTX1Q15818 432 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 H1FNTQ75WM6 255 aaPredicted RBP16.1■□□□□ 0.17
CLN6-204ENST00000564752 LINGO2Q7L985 606 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 C10orf53Q8N6V4 93 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 ADPRHL1Q8NDY3 354 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 OR6S1Q8NH40 331 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 BCL2L2Q92843 193 aaPredicted RBP16.1■□□□□ 0.17
CLN6-204ENST00000564752 FBXO17Q96EF6 278 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 SLC38A2Q96QD8 506 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 TMEM43Q9BTV4 400 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 ASPNQ9BXN1 380 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 GID8Q9NWU2 228 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 TMEM160Q9NX00 188 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 B3GAT1Q9P2W7 334 aa16.1■□□□□ 0.17
CLN6-204ENST00000564752 LOC100653049A0A140TA62 436 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 SLC43A1O75387 559 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 UPK3AO75631 287 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 KRT34O76011 436 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 LY6HO94772 140 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 ENTPD8Q5MY95 495 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 CYB5R2Q6BCY4 276 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 ERICH5Q6P6B1 374 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 ANKRD16Q6P6B7 361 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 CCDC80Q76M96 950 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 CALHM3Q86XJ0 350 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 UEVLDQ8IX04 471 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
CLN6-204ENST00000564752 C10orf82Q8WW14 230 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 ZNF317Q96PQ6 595 aaPredicted RBP16.09■□□□□ 0.17
CLN6-204ENST00000564752 KCNK17Q96T54 332 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 LINC00470Q9BZP3 86 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 ARMCX1Q9P291 453 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 CRNNQ9UBG3 495 aaPredicted RBP16.09■□□□□ 0.17
CLN6-204ENST00000564752 CDC42EP3Q9UKI2 254 aa16.09■□□□□ 0.17
CLN6-204ENST00000564752 ARPC4-TTLL3A0A0A6YYG9 625 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 SLC22A2O15244 555 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 BGLAPP02818 100 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 FAM157CP0CG43 387 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 HOXB1P14653 301 aaPredicted RBP16.08■□□□□ 0.16
CLN6-204ENST00000564752 USF1P22415 310 aaPredicted RBP16.08■□□□□ 0.16
CLN6-204ENST00000564752 ROR2Q01974 943 aaKnown RBP16.08■□□□□ 0.16
CLN6-204ENST00000564752 RBM45Q8IUH3 476 aaKnown RBP16.08■□□□□ 0.16
CLN6-204ENST00000564752 SCAIQ8N9R8 606 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 OR4D11Q8NGI4 311 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 ADAMTS16Q8TE57 1224 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 SLC41A3Q96GZ6 507 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 MOGAT1Q96PD6 335 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 KATNB1Q9BVA0 655 aa16.08■□□□□ 0.16
CLN6-204ENST00000564752 LOC102725191A0A1B0GVB3 256 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 TRAPPC13A5PLN9 417 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 VWC2LB2RUY7 222 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 TRAF3IP2O43734 574 aaPredicted RBP16.07■□□□□ 0.16
CLN6-204ENST00000564752 ZNF432O94892 652 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 CRYAAP02489 173 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 IGHV4-31P0DP07 118 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 SERPINF1P36955 418 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 CRYBA2P53672 197 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 SH3BGRP55822 239 aaPredicted RBP16.07■□□□□ 0.16
CLN6-204ENST00000564752 UBE2NP61088 152 aaKnown RBP16.07■□□□□ 0.16
CLN6-204ENST00000564752 LSM11P83369 360 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLN6-204ENST00000564752 PMS2P3Q13401 168 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 C3orf36Q3SXR2 165 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 GPR137CQ8N3F9 429 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 PIK3C3Q8NEB9 887 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 ANKK1Q8NFD2 765 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 RCN3Q96D15 328 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 KCNS3Q9BQ31 491 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 NELFAQ9H3P2 528 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 CA10Q9NS85 328 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 MRPL39Q9NYK5 338 aaKnown RBP16.07■□□□□ 0.16
CLN6-204ENST00000564752 SLC7A7Q9UM01 511 aa16.07■□□□□ 0.16
CLN6-204ENST00000564752 A0A096LPE4 126 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 A0A1W2PPZ6 126 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 FAM220BPB1ANY3 271 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 LRRN3E7EW58 273 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 RPL36A-HNRNPH2H7BZ11 118 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 MT-ATP6P00846 226 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 IGLV1-44P01699 117 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 PDLIM4P50479 330 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 SNRPD2P62316 118 aaKnown RBP16.06■□□□□ 0.16
CLN6-204ENST00000564752 NAAAQ02083 359 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 POU3F1Q03052 451 aaPredicted RBP16.06■□□□□ 0.16
CLN6-204ENST00000564752 PUDPQ08623 228 aa16.06■□□□□ 0.16
CLN6-204ENST00000564752 TTC33Q6PID6 262 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms