RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 M0R3G1 203 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 WIPF1O43516 503 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 SLC22A3O75751 556 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 SEC14L2O76054 403 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 ANP32DO95626 131 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 HPXP02790 462 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 SAGP10523 405 aaPredicted RBP16.05■□□□□ 0.16
NME3-204ENST00000563498 IDO1P14902 403 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 GRPRP30550 384 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 RPS23P62266 143 aaKnown RBP16.05■□□□□ 0.16
NME3-204ENST00000563498 HOXC5Q00444 222 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 BST1Q10588 318 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 MFSD13AQ14CX5 517 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 TRMT5Q32P41 509 aaKnown RBP16.05■□□□□ 0.16
NME3-204ENST00000563498 PDCD4Q53EL6 469 aaKnown RBP16.05■□□□□ 0.16
NME3-204ENST00000563498 PHYHD1Q5SRE7 291 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 MSANTD1Q6ZTZ1 278 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 UEVLDQ8IX04 471 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 TEX29Q8N6K0 151 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 ZNF418Q8TF45 676 aaPredicted RBP16.05■□□□□ 0.16
NME3-204ENST00000563498 MS4A3Q96HJ5 214 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 RMND5AQ9H871 391 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 RPS6KB2Q9UBS0 482 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 NOX1Q9Y5S8 564 aa16.05■□□□□ 0.16
NME3-204ENST00000563498 TRAV36DV7A0A075B6V5 113 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 TRPC5OSA6NMA1 111 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 FAM157AC9JC47 383 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 HDAC3O15379 428 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 RGS16O15492 202 aaPredicted RBP16.04■□□□□ 0.16
NME3-204ENST00000563498 CD79AP11912 226 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 COL8A2P25067 703 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 EPHA3P29320 983 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 FXNQ16595 210 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 KRT71Q3SY84 523 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 SHQ1Q6PI26 577 aaKnown RBP16.04■□□□□ 0.16
NME3-204ENST00000563498 ZNF813Q6ZN06 617 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 USP43Q70EL4 1123 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 SNX32Q86XE0 403 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 OR6S1Q8NH40 331 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 OR51F2Q8NH61 342 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 BBS10Q8TAM1 723 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 DNAJA4Q8WW22 397 aaPredicted RBP16.04■□□□□ 0.16
NME3-204ENST00000563498 SLC41A3Q96GZ6 507 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 ITCHQ96J02 903 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 WDR55Q9H6Y2 383 aaPredicted RBP16.04■□□□□ 0.16
NME3-204ENST00000563498 A4GALTQ9NPC4 353 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 B3GAT2Q9NPZ5 323 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 KLHL14Q9P2G3 628 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 FBXL3Q9UKT7 428 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 CORINQ9Y5Q5 1042 aa16.04■□□□□ 0.16
NME3-204ENST00000563498 IGKV1D-42A0A075B6H8 117 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 TRAV20A0A0B4J274 112 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 MS4A18H0YCH9 400 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 GAAP10253 952 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 BMP2P12643 396 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 PRKAR1BP31321 381 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 ALDH3B1P43353 468 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 ACTG1P63261 375 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 GALK2Q01415 458 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 MS4A18Q3C1V0 323 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 GTDC1Q4AE62 458 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 CARM1Q86X55 608 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 SCAIQ8N9R8 606 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 SGMS2Q8NHU3 365 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 FAM216AQ8WUB2 273 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 VPS33AQ96AX1 596 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 LRRC37BQ96QE4 947 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 SYT3Q9BQG1 590 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 ZNF385DQ9H6B1 395 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 ZNF224Q9NZL3 707 aa16.03■□□□□ 0.16
NME3-204ENST00000563498 A0A087WUJ7 227 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 A0A1B0GWA3 101 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 TMEM89A2RUT3 159 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 HPRP00739 348 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 ETS2P15036 469 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 NQO1P15559 274 aaKnown RBP16.02■□□□□ 0.16
NME3-204ENST00000563498 TCN1P20061 433 aaPredicted RBP16.02■□□□□ 0.16
NME3-204ENST00000563498 HTR2AP28223 471 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 SEC24CP53992 1094 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 HILS1P60008 231 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 PIGFQ07326 219 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 FADDQ13158 208 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 MPP2Q14168 576 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 RGNQ15493 299 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 ALG10BQ5I7T1 473 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 GKAP1Q5VSY0 366 aaPredicted RBP16.02■□□□□ 0.16
NME3-204ENST00000563498 CARD17Q5XLA6 110 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 FAM91A1Q658Y4 838 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 ULK3Q6PHR2 472 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 NHLRC1Q6VVB1 395 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 YIPF5Q969M3 257 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 ZNF416Q9BWM5 594 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 NARFLQ9H6Q4 476 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 LPAR2Q9HBW0 351 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 SDR39U1Q9NRG7 319 aaPredicted RBP16.02■□□□□ 0.16
NME3-204ENST00000563498 ZNF275Q9NSD4 429 aaPredicted RBP16.02■□□□□ 0.16
NME3-204ENST00000563498 TREM2Q9NZC2 230 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 ZIM2Q9NZV7 527 aa16.02■□□□□ 0.16
NME3-204ENST00000563498 ZNF346Q9UL40 294 aaKnown RBP16.02■□□□□ 0.16
NME3-204ENST00000563498 PCDHB10Q9UN67 800 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms