RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SELENOSQ9BQE4 189 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TMEM121Q9BTD3 319 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 DCTN5Q9BTE1 182 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 FGFBP2Q9BYJ0 223 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 OR51M1Q9H341 326 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 C1orf198Q9H425 327 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 VIPAS39Q9H9C1 493 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TREX1Q9NSU2 369 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 IL36AQ9UHA7 158 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 ZNF221Q9UK13 617 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 NXT1Q9UKK6 140 aaKnown RBP4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 TET1Q8NFU7 2136 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 PTPRJQ12913 1337 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 SCN5AQ14524 2016 aa4.53□□□□□ -1.68
VPS35P1-201ENST00000563400 CXorf51AA0A1B0GTR3 108 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 OR6C70A6NIJ9 312 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 MKRN2OSH3BPM6 223 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 M0R3G1 203 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 TFECO14948 347 aaPredicted RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 TOX3O15405 576 aaPredicted RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 XRCC2O43543 280 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 RFPL2O75678 378 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 ATP5LO75964 103 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 ANXA9O76027 345 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 VAPBO95292 243 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 ATP1B1P05026 303 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 GSTA1P08263 222 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 KRT7P08729 469 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 MYOD1P15172 320 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 AADACP22760 399 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 CCR8P51685 355 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 TMEM50BP56557 158 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 POLR2GP62487 172 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 KCNJ2P63252 427 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 EEF1A1P68104 462 aaKnown RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 ADARB1P78563 741 aaKnown RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC7A9P82251 487 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 STX5Q13190 355 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 RGS21Q2M5E4 152 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 PTPN20Q4JDL3 420 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 COQ5Q5HYK3 327 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC35D3Q5M8T2 416 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 C1orf220Q5T0J3 134 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 PRAMEF17Q5VTA0 474 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 EEF1A1P5Q5VTE0 462 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 KHDRBS2Q5VWX1 349 aaKnown RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 TIGD3Q6B0B8 471 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 ADNP2Q6IQ32 1131 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 DNAJC24Q6P3W2 148 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 LEG1Q6P5S2 330 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC25A47Q6Q0C1 308 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 FAM151BQ6UXP7 276 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 GCNT7Q6ZNI0 430 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC16A12Q6ZSM3 486 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 HDDC2Q7Z4H3 204 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 RALGPS2Q86X27 583 aaPredicted RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 INO80EQ8NBZ0 244 aaPredicted RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 DMBX1Q8NFW5 382 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 LMO3Q8TAP4 145 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 OSR1Q8TAX0 266 aaPredicted RBP4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 FGF13Q92913 245 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 MYDGFQ969H8 173 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 HAUS1Q96CS2 278 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 BTN2A3PQ96KV6 586 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 OPALINQ96PE5 141 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 PPP1R2P1Q96PQ5 205 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 MAPKAP1Q9BPZ7 522 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC30A2Q9BRI3 323 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 BEX2Q9BXY8 128 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 SHARPINQ9H0F6 387 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 RACGAP1Q9H0H5 632 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC38A1Q9H2H9 487 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 PPA2Q9H2U2 334 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 EGLN3Q9H6Z9 239 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 BEX1Q9HBH7 125 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 ANKHQ9HCJ1 492 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 NANSQ9NR45 359 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 FAM49BQ9NUQ9 324 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 KLRF1Q9NZS2 232 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 PDE10AQ9Y233 779 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 CFL2Q9Y281 166 aa4.52□□□□□ -1.69
VPS35P1-201ENST00000563400 A0A1W2PNV4 684 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 FAM92AA1XBS5 289 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SIGLEC16A6NMB1 481 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ANHXE9PGG2 379 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 LMO7DNF2Z398 122 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 RNASEK-C17orf49H0YIS7 233 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 ZNF195O14628 629 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 RGS16O15492 202 aaPredicted RBP4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SLC19A2O60779 497 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 WDR1O75083 606 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 SEMA3DO95025 777 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 LINC00271P0C7V0 271 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 IMPDH1P20839 514 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 GNLYP22749 145 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 GCAP28676 217 aa4.51□□□□□ -1.69
VPS35P1-201ENST00000563400 UGT2B10P36537 528 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms