RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ST7LQ8TDW4 575 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 DACT3Q96B18 629 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 UPRTQ96BW1 309 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 MOAP1Q96BY2 351 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 TIMD4Q96H15 378 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 MRI1Q9BV20 369 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 TUBB1Q9H4B7 451 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 MARCH7Q9H992 704 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 ADPRHL2Q9NX46 363 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 DCAF16Q9NXF7 216 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 UBAP1Q9NZ09 502 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 ASH2LQ9UBL3 628 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC7A8Q9UHI5 535 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 KLHL21Q9UJP4 597 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 RASD1Q9Y272 281 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 NOTCH3Q9UM47 2321 aa6.5□□□□□ -1.37
HERPUD1-206ENST00000563343 TRAV40A0A0B4J280 105 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 DUXAA6NLW8 204 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 FTCDNL1E5RQL4 147 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 F5H0A9 414 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 LSM1O15116 133 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 TM9SF1O15321 606 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 SHOX2O60902 331 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 NPIPB7O75200 414 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 OPN1MWP04001 364 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 OPN1MW2P0DN77 364 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 OPN1MW3P0DN78 364 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 TAC1P20366 129 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 MATN1P21941 496 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 CAPZA2P47755 286 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 ERVS71-1P61550 626 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 HBA1P69905 142 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 KCNJ10P78508 379 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 BNIP2Q12982 314 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 PDCD1Q15116 288 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 C2orf68Q2NKX9 166 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 GKAP1Q5VSY0 366 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 LIPMQ5VYY2 423 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 FAM205BPQ63HN1 556 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 RUSC1-AS1Q66K80 236 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 RGS7BPQ6MZT1 257 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 TMEM154Q6P9G4 183 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 RNF165Q6ZSG1 346 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 C6orf120Q7Z4R8 191 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 R3HCC1LQ7Z5L2 792 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC22A9Q8IVM8 553 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 CLEC4FQ8N1N0 589 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 OR52E2Q8NGJ4 325 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 FGFBP3Q8TAT2 258 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 MIPOL1Q8TD10 442 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 COQ8BQ96D53 544 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 OR2M2Q96R28 347 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 PAFAH2Q99487 392 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 SAP30LQ9HAJ7 183 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 PATZ1Q9HBE1 687 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 TCF7L1Q9HCS4 588 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 POLE3Q9NRF9 147 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 AURKAIP1Q9NWT8 199 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 WDR45Q9Y484 360 aa6.49□□□□□ -1.37
HERPUD1-206ENST00000563343 ISPDA4D126 451 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 AGAP5A6NIR3 686 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 GOLGA6L6A8MZA4 724 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC28A1O00337 649 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 CRYBA1P05813 215 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 INHBAP08476 426 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 MELTFP08582 738 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 UROSP10746 265 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 PNMTP11086 282 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 CD79AP11912 226 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 GIPRP48546 466 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 PTDSS1P48651 473 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 SERPINB9P50453 376 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 KLF3P57682 345 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 RPL15P61313 204 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 RAB1AP62820 205 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 RPL38P63173 70 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 GALK2Q01415 458 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 CAV1Q03135 178 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 EPS8Q12929 822 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 RAB39AQ14964 217 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 TSTQ16762 297 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 FAM153CQ494X1 144 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 SPDYE7PQ495Y7 208 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 FAM209AQ5JX71 171 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 CLEC6AQ6EIG7 209 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 FRMD7Q6ZUT3 714 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 GPR137CQ8N3F9 429 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 TMEM86BQ8N661 226 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 POU5F2Q8N7G0 328 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 SYNPRQ8TBG9 265 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 CCL17Q92583 94 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 ROPN1LQ96C74 230 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 ELMOD3Q96FG2 381 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 SLC35G5Q96KT7 338 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 PTDSS2Q9BVG9 487 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 OR51I1Q9H343 314 aa6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 DENND2DQ9H6A0 471 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-206ENST00000563343 TNFRSF19Q9NS68 423 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms