RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ZNF775Q96BV0 537 aaPredicted RBP13.84□□□□□ -0.19
USB1-208ENST00000563207 DNAJA3Q96EY1 480 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 Q96MF0 132 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 CCL19Q99731 98 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 KRCC1Q9NPI7 259 aaPredicted RBP13.84□□□□□ -0.19
USB1-208ENST00000563207 ING1Q9UK53 422 aaPredicted RBP13.84□□□□□ -0.19
USB1-208ENST00000563207 TMEM5Q9Y2B1 443 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 ZANQ9Y493 2812 aa13.84□□□□□ -0.19
USB1-208ENST00000563207 A0A087WUU8 490 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 ZNF716A6NP11 495 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 H7C1Q1 480 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 DIRAS1O95057 198 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 P2RY4P51582 365 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 UGT2B15P54855 530 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 SPIBQ01892 262 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 PRKCDQ05655 676 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 SLC17A1Q14916 467 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 ZSCAN26Q16670 478 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 KRTAP21-3Q3LHN1 58 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 ANKDD1AQ495B1 522 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.83□□□□□ -0.2
USB1-208ENST00000563207 GALNT5Q7Z7M9 940 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 CCDC103Q8IW40 242 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 PAPD5Q8NDF8 572 aaKnown RBP13.83□□□□□ -0.2
USB1-208ENST00000563207 OR5J2Q8NH18 312 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 IGFBPL1Q8WX77 278 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 UTP4Q969X6 686 aaKnown RBP13.83□□□□□ -0.2
USB1-208ENST00000563207 SGTBQ96EQ0 304 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 PLPPR2Q96GM1 343 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 OXGR1Q96P68 337 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 CHID1Q9BWS9 393 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 ACTR6Q9GZN1 396 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 FANCFQ9NPI8 374 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 PARPBPQ9NWS1 579 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 TMCC3Q9ULS5 477 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 AURKCQ9UQB9 309 aa13.83□□□□□ -0.2
USB1-208ENST00000563207 M0R082 166 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 KPNA4O00629 521 aaPredicted RBP13.82□□□□□ -0.2
USB1-208ENST00000563207 SMAD7O15105 426 aaKnown RBP13.82□□□□□ -0.2
USB1-208ENST00000563207 LY6G6DO95868 133 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 CH25HO95992 272 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 ASAH2BP0C7U1 165 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 NQO1P15559 274 aaKnown RBP13.82□□□□□ -0.2
USB1-208ENST00000563207 RRM2P31350 389 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 IFNGR2P38484 337 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 PMS2P3Q13401 168 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 FGD3Q5JSP0 725 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 SHEQ5VZ18 495 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 OR2T5Q6IEZ7 315 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 CLEC9AQ6UXN8 241 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 TFAP2EQ6VUC0 442 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 STK32CQ86UX6 486 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 OR2T29Q8NH02 315 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 LILRB1Q8NHL6 650 aaPredicted RBP13.82□□□□□ -0.2
USB1-208ENST00000563207 ZNF417Q8TAU3 575 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 NEUROG1Q92886 237 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 PIGTQ969N2 578 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 S100PBPQ96BU1 408 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 BPIFA2Q96DR5 249 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 DUS3LQ96G46 650 aaKnown RBP13.82□□□□□ -0.2
USB1-208ENST00000563207 RSRC1Q96IZ7 334 aaKnown RBP13.82□□□□□ -0.2
USB1-208ENST00000563207 MOGAT1Q96PD6 335 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 ZNF587Q96SQ5 575 aaPredicted RBP13.82□□□□□ -0.2
USB1-208ENST00000563207 FUZQ9BT04 418 aa13.82□□□□□ -0.2
USB1-208ENST00000563207 ARID1AO14497 2285 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 ROS1P08922 2347 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 ZNF814B7Z6K7 855 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 PLPP3O14495 311 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 OR7A10O76100 309 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 OR6A2O95222 327 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 IFI30P13284 250 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 ZNF43P17038 809 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 FUT1P19526 365 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 SLC9A3P48764 834 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 PUDPQ08623 228 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 ZP4Q12836 540 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 PODNL1Q6PEZ8 512 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 ZNF704Q6ZNC4 412 aaPredicted RBP13.81□□□□□ -0.2
USB1-208ENST00000563207 BEND4Q6ZU67 534 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 TMPRSS11FQ6ZWK6 438 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 SLC46A3Q7Z3Q1 461 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 PXKQ7Z7A4 578 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 BIVMQ86UB2 503 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 GPAT4Q86UL3 456 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 NRMQ8IXM6 262 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 GABRG1Q8N1C3 465 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 OR9K2Q8NGE7 335 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 OR52J3Q8NH60 311 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 PFN4Q8NHR9 129 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 TMEM45BQ96B21 275 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 REEP1Q9H902 201 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 C20orf141Q9NUB4 165 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 PRSS50Q9UI38 385 aa13.81□□□□□ -0.2
USB1-208ENST00000563207 TRBV4-1A0A0J9YWV2 114 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 SH3PXD2BA1X283 911 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 MS4A18H0YCH9 400 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 TNFRSF11BO00300 401 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 RAMP1O60894 148 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 FKBP6O75344 327 aa13.8□□□□□ -0.2
USB1-208ENST00000563207 CNOT4O95628 575 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms