RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 CXXC5Q7LFL8 322 aaKnown RBP11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 PXKQ7Z7A4 578 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 DHDDSQ86SQ9 333 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 SNX32Q86XE0 403 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 C20orf196Q8IYI0 205 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 SPATA3Q8NHX4 192 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 CKAP2Q8WWK9 683 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 HTRA1Q92743 480 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 PRR14Q9BWN1 585 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 ZNF385DQ9H6B1 395 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 VIPAS39Q9H9C1 493 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 CDC42EP3Q9UKI2 254 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 USP22Q9UPT9 525 aa11.38□□□□□ -0.59
AC009055.1-201ENST00000562656 LOC390937A0A1W2PQ73 354 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 VWC2LB2RUY7 222 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 ANGPT2O15123 496 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 OR4A8P0C604 315 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 AQP1P29972 269 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 CALCRP30988 508 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 PPOXP50336 477 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 CDH12P55289 794 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 TUBA1BP68363 451 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 TUBA4AP68366 448 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 IL1RL1Q01638 556 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 PUDPQ08623 228 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 PMS2P3Q13401 168 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 METTL21CQ5VZV1 264 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 CYB5R2Q6BCY4 276 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 TUBA1AQ71U36 451 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 PATL1Q86TB9 770 aaKnown RBP11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 SORCS2Q96PQ0 1159 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 CGREF1Q99674 301 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 MCHR1Q99705 422 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 ARHGDIGQ99819 225 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 DENND2DQ9H6A0 471 aaPredicted RBP11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 B3GAT2Q9NPZ5 323 aa11.37□□□□□ -0.59
AC009055.1-201ENST00000562656 SLC35F4A4IF30 521 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 ZNF726A6NNF4 738 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 M0QX08 132 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 M0R3G1 203 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 PLPP3O14495 311 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 CHP2O43745 196 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 HPRP00739 348 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 VIMP08670 466 aaKnown RBP11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 HLA-DOBP13765 273 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 CBLP22681 906 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 GZMKP49863 264 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 IDH3GP51553 393 aaPredicted RBP11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 HGFACQ04756 655 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 DUSP7Q16829 419 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 CYP51A1Q16850 503 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 HDXQ7Z353 690 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 SLC46A3Q7Z3Q1 461 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 SMYD1Q8NB12 490 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 ZNF540Q8NDQ6 660 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 RASSF5Q8WWW0 418 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 MOGAT1Q96PD6 335 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 VRK1Q99986 396 aaPredicted RBP11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 WFDC6Q9BQY6 131 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 PIMREGQ9BSJ6 248 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 RAB1BQ9H0U4 201 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 KAT8Q9H7Z6 458 aaKnown RBP11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 MRGBPQ9NV56 204 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 B3GNT2Q9NY97 397 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 LPAR3Q9UBY5 353 aa11.36□□□□□ -0.59
AC009055.1-201ENST00000562656 IGHV2OR16-5A0A0B4J2B6 119 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 EDF1O60869 148 aaKnown RBP11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 LY6HO94772 140 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 ERCC1P07992 297 aaPredicted RBP11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 FAM157CP0CG43 387 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 NPR2P20594 1047 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 NR4A2P43354 598 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 ZP4Q12836 540 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 PHYHD1Q5SRE7 291 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 VHLLQ6RSH7 139 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 MDP1Q86V88 176 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 C10orf53Q8N6V4 93 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 OR6T1Q8NGN1 323 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 OR6N1Q8NGY5 312 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 OR5J2Q8NH18 312 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 MPP4Q96JB8 637 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 KCNK17Q96T54 332 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 DOK1Q99704 481 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 SLC19A3Q9BZV2 496 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 PCDHAC1Q9H158 963 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 SEC61A2Q9H9S3 476 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 MED29Q9NX70 200 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 FBXL3Q9UKT7 428 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 POFUT2Q9Y2G5 429 aa11.35□□□□□ -0.59
AC009055.1-201ENST00000562656 ATRQ13535 2644 aa11.34□□□□□ -0.59
AC009055.1-201ENST00000562656 RTTNQ86VV8 2226 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms