RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SH3PXD2BA1X283 911 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 ZNF503-AS2A6NEH8 195 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 HNRNPCL2B2RXH8 293 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 B4DSR2 109 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 HNRNPCL3B7ZW38 293 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 ANKRD65E5RJM6 399 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 RFXANKO14593 260 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 BCHEP06276 602 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 ADRA2AP08913 450 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 ZCCHC18P0CG32 403 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 HNRNPCL4P0DMR1 293 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 GTF2E2P29084 291 aaKnown RBP10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 RPS5P46782 204 aaKnown RBP10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 NME5P56597 212 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 DSTNP60981 165 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 NCALDP61601 193 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 RUNX1T1Q06455 604 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 SNTB2Q13425 540 aaKnown RBP10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 DAG1Q14118 895 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 TRIP10Q15642 601 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 C12orf54Q6X4T0 127 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 SERPINA11Q86U17 422 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 CDK20Q8IZL9 346 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 GPR137CQ8N3F9 429 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 PIK3C3Q8NEB9 887 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 ZBTB18Q99592 522 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 MS4A5Q9H3V2 200 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 C12orf10Q9HB07 376 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 NOX3Q9HBY0 568 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 CRLF2Q9HC73 371 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 GPR35Q9HC97 309 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 MRGBPQ9NV56 204 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 THUMPD1Q9NXG2 353 aaKnown RBP10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 USP22Q9UPT9 525 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 IFT52Q9Y366 437 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 CMAHPQ9Y471 501 aa10.21□□□□□ -0.77
CARMIL3-204ENST00000561354 ZNF99A8MXY4 864 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 SDHDO14521 159 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 SYNGR3O43761 229 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 AKAP8O43823 692 aaKnown RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 OR2T1O43869 369 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 IL6P05231 212 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 ETFAP13804 333 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 NR4A1P22736 598 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 CFPP27918 469 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 CRATP43155 626 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 NPRL3Q12980 569 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 C1DQ13901 141 aaKnown RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 CEACAM16Q2WEN9 425 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 SLC9B1Q4ZJI4 515 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 C5orf46Q6UWT4 87 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 ASRGL1Q7L266 308 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 NET1Q7Z628 596 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 MDP1Q86V88 176 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 MRPL24Q96A35 216 aaKnown RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF837Q96EG3 531 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 KTI12Q96EK9 354 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 OR2M2Q96R28 347 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 TPT1P8Q9HAU6 139 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 CACYBPQ9HB71 228 aaKnown RBP10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 SLC6A13Q9NSD5 602 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 PNPOQ9NVS9 261 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 B3GNT2Q9NY97 397 aa10.2□□□□□ -0.78
CARMIL3-204ENST00000561354 TMEM247A6NEH6 219 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 LYNX1G3V0Z9 82 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 M0R233 179 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 AIM2O14862 343 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 VENTXO95231 258 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 LYNX1P0DP58 116 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF35P13682 527 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 CALB2P22676 271 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 GLRXP35754 106 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 AQP5P55064 265 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 IL1RL1Q01638 556 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 SF3A3Q12874 501 aaKnown RBP eCLIP10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 CCNIQ14094 377 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF311Q5JNZ3 666 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 RPS26P11Q5JNZ5 115 aaPredicted RBP10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 ELFN2Q5R3F8 820 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 FAM69AQ5T7M9 428 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 METTL21CQ5VZV1 264 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 KRT80Q6KB66 452 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 RINLQ6ZS11 566 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 ZNF627Q7L945 461 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 GLCCI1Q86VQ1 547 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 TMEM123Q8N131 208 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 LSMEM1Q8N8F7 131 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 SLC38A4Q969I6 547 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 THOC1Q96FV9 657 aaKnown RBP10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 TMEM19Q96HH6 336 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 PLA2G12AQ9BZM1 189 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 RACGAP1Q9H0H5 632 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 TPK1Q9H3S4 243 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 BCL2L10Q9HD36 194 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 REV1Q9UBZ9 1251 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 SEC14L4Q9UDX3 406 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 SPEF1Q9Y4P9 236 aa10.19□□□□□ -0.78
CARMIL3-204ENST00000561354 M0R082 166 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms