RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 EIF1BO60739 113 aaKnown RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 RP2O75695 350 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 C6orf47O95873 294 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 BCKDHAP12694 445 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 ACADSP16219 412 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 RYKP34925 604 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 SELENOPP49908 381 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 P2RY4P51582 365 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 UBE2NP61088 152 aaKnown RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 SLC35A1P78382 337 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 FUT5Q11128 374 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 FOXL1Q12952 345 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 SNTB2Q13425 540 aaKnown RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 FLOT2Q14254 428 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 MMEL1Q495T6 779 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 PDCD4Q53EL6 469 aaKnown RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 COQ5Q5HYK3 327 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 OTUD3Q5T2D3 398 aaPredicted RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 DHDDSQ86SQ9 333 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 FUNDC1Q8IVP5 155 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 HOMEZQ8IX15 550 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 TMEM99Q8N816 258 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 PCYOX1LQ8NBM8 494 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 OR9I1Q8NGQ6 314 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 ZNF563Q8TA94 476 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 RNF217Q8TC41 542 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 MAGEE2Q8TD90 523 aaPredicted RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 SLC26A7Q8TE54 656 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 TSPEARQ8WU66 669 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 C22orf15Q8WYQ4 148 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 OR5P2Q8WZ92 322 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 ROPN1LQ96C74 230 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 C1orf147Q96MC9 270 aaPredicted RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 UNKLQ9H9P5 680 aaKnown RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 SDR39U1Q9NRG7 319 aaPredicted RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 ZNF275Q9NSD4 429 aaPredicted RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 CCDC167Q9P0B6 97 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 MYEF2Q9P2K5 600 aaKnown RBP8.51□□□□□ -1.05
TPM1-225ENST00000560679 ZNF281Q9Y2X9 895 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 NDUFAF1Q9Y375 327 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 GPR45Q9Y5Y3 372 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 RYR3Q15413 4870 aa8.51□□□□□ -1.05
TPM1-225ENST00000560679 WNK2Q9Y3S1 2297 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 TMED7-TICAM2A0A0A6YYA0 188 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 H3BNX3 289 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 SLC28A1O00337 649 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 ANGPT2O15123 496 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 SYNGR3O43761 229 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 DEAF1O75398 565 aaPredicted RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 STX11O75558 287 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 UPK3AO75631 287 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 AKR7A3O95154 331 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 BAG2O95816 211 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 TCN1P20061 433 aaPredicted RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 ACHEP22303 614 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 ZFP36P26651 326 aaKnown RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 FKBP2P26885 142 aaKnown RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 HPCAL1P37235 193 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 ERFP50548 548 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 MAD2L1BPQ15013 274 aaPredicted RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 ARHGAP11BQ3KRB8 267 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 SPDYE7PQ495Y7 208 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 SAMD4BQ5PRF9 694 aaKnown RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 KRT80Q6KB66 452 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 C8orf82Q6P1X6 216 aaPredicted RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 ZFP1Q6P2D0 407 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 RNF165Q6ZSG1 346 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 R3HCC1LQ7Z5L2 792 aaKnown RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 ABHD12BQ7Z5M8 362 aaPredicted RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 HMGN2P46Q86SG4 172 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 CLEC4FQ8N1N0 589 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 PYDC1Q8WXC3 89 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 TAF15Q92804 592 aaKnown RBP eCLIP8.5□□□□□ -1.05
TPM1-225ENST00000560679 NAA11Q9BSU3 229 aaPredicted RBP8.5□□□□□ -1.05
TPM1-225ENST00000560679 VCX3BQ9H321 246 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 SPAG4Q9NPE6 437 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 ADA2Q9NZK5 511 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 ZIM2Q9NZV7 527 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 OPN4Q9UHM6 478 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 OSGIN1Q9UJX0 560 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 PCDHGB4Q9UN71 923 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 SLC35A3Q9Y2D2 325 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 TMED7Q9Y3B3 224 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 CORINQ9Y5Q5 1042 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 WNK1Q9H4A3 2382 aa8.5□□□□□ -1.05
TPM1-225ENST00000560679 A0A0G2JMP0 313 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 A0A0X1KG70 313 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 LIPT2A6NK58 231 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 AQP7P3A6NL99 342 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 M0R233 179 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 ACOT8O14734 319 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 ZNF208O43345 1280 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 PRSS23O95084 383 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 BCL10O95999 233 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 AK1P00568 194 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 RPSAP08865 295 aaKnown RBP8.49□□□□□ -1.05
TPM1-225ENST00000560679 CBR1P16152 277 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 PAX7P23759 505 aa8.49□□□□□ -1.05
TPM1-225ENST00000560679 SOAT1P35610 550 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms