RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 POLR2J3Q9H1A7 115 aaKnown RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 SEMA6AQ9H2E6 1030 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 TMEM185BQ9H7F4 350 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 METTL17Q9H7H0 456 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-215ENST00000560424 Q9N2J8 555 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 KLHL13Q9P2N7 655 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 RAB26Q9ULW5 256 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 WDR45Q9Y484 360 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ATP23Q9Y6H3 246 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 ENPP4Q9Y6X5 453 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 V9GYQ6 96 aa8.17□□□□□ -1.1
SMAD3-215ENST00000560424 A0A087WZY1 265 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 TMEM89A2RUT3 159 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ARRDC5A6NEK1 342 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 VWC2LB2RUY7 222 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 NPIPB9F8W1W9 429 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 FCMRO60667 390 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 RGS9O75916 674 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-215ENST00000560424 TGP01266 2768 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 OPN1SWP03999 348 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 IFNW1P05000 195 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 DBIP07108 87 aaKnown RBP8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ATP6V1C1P21283 382 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 APEX1P27695 318 aaKnown RBP8.16□□□□□ -1.1
SMAD3-215ENST00000560424 LIMS1P48059 325 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF83P51522 516 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF41P51814 821 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ARHGDIAP52565 204 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 RAC1P63000 192 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 CHRNEQ04844 493 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 EPS8Q12929 822 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF141Q15928 474 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 DECR1Q16698 335 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 RFX4Q33E94 735 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 LIN52Q52LA3 116 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 UGT2A3Q6UWM9 527 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 Q6ZT83 130 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 NUFIP2Q7Z417 695 aaKnown RBP8.16□□□□□ -1.1
SMAD3-215ENST00000560424 MARCH3Q86UD3 253 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 CMIPQ8IY22 773 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 CBR4Q8N4T8 237 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 LINC01356Q8N9X3 169 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 SEMA6DQ8NFY4 1073 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 OR4N2Q8NGD1 307 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 GPR151Q8TDV0 419 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 RNF138Q8WVD3 245 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 CPNE4Q96A23 557 aaPredicted RBP8.16□□□□□ -1.1
SMAD3-215ENST00000560424 FOXN4Q96NZ1 517 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 JMJD8Q96S16 334 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ARHGDIGQ99819 225 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 CIB1Q99828 191 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ARMC7Q9H6L4 198 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF696Q9H7X3 374 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 COQ10BQ9H8M1 238 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 FKRPQ9H9S5 495 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 HHATLQ9HCP6 504 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF232Q9UNY5 417 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 SLC9A8Q9Y2E8 581 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 LRCH1Q9Y2L9 728 aa8.16□□□□□ -1.1
SMAD3-215ENST00000560424 A0A1W2PRQ8 180 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 CIB4A0PJX0 185 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 G3V2T6 193 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 M0R1B8 84 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 DLGAP1O14490 977 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SOCS2O14508 198 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 GNGT2O14610 69 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SMAD9O15198 467 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 DENRO43583 198 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 FADS1O60427 444 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 FMO6PO60774 539 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 UGT2B17O75795 530 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ANGPTL1O95841 491 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 MT-ND1P03886 318 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ALPLP05186 524 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 YES1P07947 543 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 NGFRP08138 427 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 APOBEC3AP31941 199 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 GABRA3P34903 492 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ALDH3A2P51648 485 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 CHN2P52757 468 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 AQP4P55087 323 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SMIM11AP58511 58 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SNRPD2P62316 118 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 LGALS3BPQ08380 585 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 DAG1Q14118 895 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 DGCR6Q14129 220 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 LARS2Q15031 903 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF239Q16600 458 aaKnown RBP8.15□□□□□ -1.1
SMAD3-215ENST00000560424 LRRC36Q1X8D7 754 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ZNF311Q5JNZ3 666 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SHISA2Q6UWI4 295 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 NPSR1Q6W5P4 371 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 FCRLAQ7L513 359 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 SMYD1Q8NB12 490 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 TOR1AIP2Q8NFQ8 470 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 OR4C15Q8NGM1 316 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 OR52P1PQ8NH57 321 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 RNF128Q8TEB7 428 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 FAM216AQ8WUB2 273 aa8.15□□□□□ -1.1
SMAD3-215ENST00000560424 ZBTB8AQ96BR9 441 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms