RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 RASSF5Q8WWW0 418 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 OR2M2Q96R28 347 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 MCHR1Q99705 422 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 EBF4Q9BQW3 602 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 REPIN1Q9BWE0 567 aaKnown RBP10.94□□□□□ -0.66
SNX1-209ENST00000559961 ULBP2Q9BZM5 246 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 DENND2DQ9H6A0 471 aaPredicted RBP10.94□□□□□ -0.66
SNX1-209ENST00000559961 ZNF442Q9H7R0 627 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 SLCO1B3Q9NPD5 702 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 MRGBPQ9NV56 204 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 TMEM160Q9NX00 188 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 SLC25A37Q9NYZ2 338 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 VAPAQ9P0L0 249 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 KLHL14Q9P2G3 628 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 ADAM21Q9UKJ8 722 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 CMAHPQ9Y471 501 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 CHST2Q9Y4C5 530 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 FREM1Q5H8C1 2179 aa10.94□□□□□ -0.66
SNX1-209ENST00000559961 CSPG4Q6UVK1 2322 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 FN1P02751 2386 aaKnown RBP10.93□□□□□ -0.66
SNX1-209ENST00000559961 LOC100289279A0A1B0GTE1 492 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 HMGB1P1B2RPK0 211 aaPredicted RBP10.93□□□□□ -0.66
SNX1-209ENST00000559961 FMO6PO60774 539 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 ZNF432O94892 652 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 FARS2O95363 451 aaKnown RBP10.93□□□□□ -0.66
SNX1-209ENST00000559961 IGKV3-15P01624 115 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 ADORA3P0DMS8 318 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 NR4A2P43354 598 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 PPOXP50336 477 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 SELENOVP59797 346 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 ADIPOQQ15848 244 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 GSG1Q2KHT4 349 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 REP15Q6BDI9 236 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 ZNF613Q6PF04 617 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 HDXQ7Z353 690 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 PXKQ7Z7A4 578 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 DHDDSQ86SQ9 333 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 PATL1Q86TB9 770 aaKnown RBP10.93□□□□□ -0.66
SNX1-209ENST00000559961 FUNDC1Q8IVP5 155 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 SMYD1Q8NB12 490 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 SH3GL1Q99961 368 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 SIKE1Q9BRV8 207 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 TMEM43Q9BTV4 400 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 MRPL39Q9NYK5 338 aaKnown RBP10.93□□□□□ -0.66
SNX1-209ENST00000559961 SLAMF8Q9P0V8 285 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 GMEB1Q9Y692 573 aa10.93□□□□□ -0.66
SNX1-209ENST00000559961 A0A0B4J2E0 115 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 A0A1B0GX12 115 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 SH3PXD2BA1X283 911 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 SLC35F4A4IF30 521 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 RNF13O43567 381 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 TPST1O60507 370 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 UBL3O95164 117 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 IGLV1-44P01699 117 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 UMPSP11172 480 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 DAOP14920 347 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 SRD5A1P18405 259 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 CD247P20963 164 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 HTR2AP28223 471 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 THBS4P35443 961 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 CSNK1A1P48729 337 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 CDH12P55289 794 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 SNTB2Q13425 540 aaKnown RBP10.92□□□□□ -0.66
SNX1-209ENST00000559961 NFYCQ13952 458 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 CYLC2Q14093 348 aaPredicted RBP10.92□□□□□ -0.66
SNX1-209ENST00000559961 MST1LQ2TV78 715 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 RUNDC3AQ59EK9 446 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 MDP1Q86V88 176 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 C20orf196Q8IYI0 205 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 ANKS4BQ8N8V4 417 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 OR5J2Q8NH18 312 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 TSPEARQ8WU66 669 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 MAGEB18Q96M61 343 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 FOXN4Q96NZ1 517 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 SORCS2Q96PQ0 1159 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 EMC6Q9BV81 110 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 PRR14Q9BWN1 585 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 MS4A5Q9H3V2 200 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 SEC14L4Q9UDX3 406 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 GPR160Q9UJ42 338 aa10.92□□□□□ -0.66
SNX1-209ENST00000559961 IGHV2OR16-5A0A0B4J2B6 119 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 C11orf98E9PRG8 122 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 MS4A18H0YCH9 400 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 M0QX08 132 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 PLPP3O14495 311 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 CHP2O43745 196 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 LY6HO94772 140 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 MFN2O95140 757 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 TGFAP01135 160 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 IFNA14P01570 189 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 BGLAPP02818 100 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 ZNF16P17020 682 aaPredicted RBP10.91□□□□□ -0.66
SNX1-209ENST00000559961 PCMT1P22061 227 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 IFNA8P32881 189 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 PTDSS1P48651 473 aaKnown RBP10.91□□□□□ -0.66
SNX1-209ENST00000559961 CHN2P52757 468 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 PIGFQ07326 219 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 CAMK2DQ13557 499 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 ADRM1Q16186 407 aa10.91□□□□□ -0.66
SNX1-209ENST00000559961 MS4A18Q3C1V0 323 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms