RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 RBM4Q9BWF3 364 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 UCK2Q9BZX2 261 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 POLR2J2Q9GZM3 115 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 POLR2J3Q9H1A7 115 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 OR52D1Q9H346 318 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 FN3KQ9H479 309 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ANKRD19PQ9H560 264 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 EVA1AQ9H8M9 152 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 PAPOLBQ9NRJ5 636 aaKnown RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 PNPLA3Q9NST1 481 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 TBC1D23Q9NUY8 699 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ASF1BQ9NVP2 202 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 SMPD3Q9NY59 655 aaPredicted RBP4.66□□□□□ -1.66
SPG11-220ENST00000559933 USE1Q9NZ43 259 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 SH3BGRL2Q9UJC5 107 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CLEC4AQ9UMR7 237 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 CAMK2AQ9UQM7 478 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 SIGLEC7Q9Y286 467 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 ADAM18Q9Y3Q7 739 aa4.66□□□□□ -1.66
SPG11-220ENST00000559933 KALRNO60229 2985 aa4.65□□□□□ -1.66
SPG11-220ENST00000559933 RELNP78509 3460 aa4.65□□□□□ -1.66
SPG11-220ENST00000559933 TEX13CA0A0J9YWL9 993 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ARRDC5A6NEK1 342 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 EIF4E1BA6NMX2 242 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 BLOC1S5-TXNDC5H3BN57 136 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 SULT2B1O00204 365 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 SMAD9O15198 467 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 ZNF208O43345 1280 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 AQP8O94778 261 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ADAP00813 363 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ASAH2BP0C7U1 165 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ANXA8P13928 327 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ZNF708P17019 499 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 AHCYP23526 432 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 EDNRAP25101 427 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ELK4P28324 431 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 EIF1P41567 113 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 HTR3AP46098 478 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 DIO1P49895 249 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TDGF1P3P51864 188 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ARHGDIAP52565 204 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 RUNX1T1Q06455 604 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 RPL18Q07020 188 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 LGALS3BPQ08380 585 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TSPAN31Q12999 210 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 SLC10A1Q14973 349 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ZNF239Q16600 458 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 NHSL2Q5HYW2 709 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 SLC35F1Q5T1Q4 408 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 FAM69AQ5T7M9 428 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 CARD17Q5XLA6 110 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ZNF324BQ6AW86 544 aaPredicted RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 HBMQ6B0K9 141 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ACSM5Q6NUN0 579 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 SMARCD3Q6STE5 483 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 FAM180AQ6UWF9 173 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 RPTNQ6XPR3 784 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 RASSF6Q6ZTQ3 369 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 RRM2BQ7LG56 351 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 OAFQ86UD1 273 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TEX19Q8NA77 164 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 LRRC75AQ8NAA5 344 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 FAM98AQ8NCA5 519 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 LSM14AQ8ND56 463 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 BBS1Q8NFJ9 593 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 OR2V1Q8NHB1 315 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 FNDC9Q8TBE3 224 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ABHD3Q8WU67 409 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 NR4A3Q92570 626 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 OSTF1Q92882 214 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 NRBF2Q96F24 287 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 WDYHV1Q96HA8 205 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TXNDC15Q96J42 360 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 HS6ST2Q96MM7 605 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 GPR137Q96N19 417 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 FOXN4Q96NZ1 517 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TSPAN32Q96QS1 320 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TIMP4Q99727 224 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TUBA1CQ9BQE3 449 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 RHNO1Q9BSD3 238 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ADI1Q9BV57 179 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 DGCR6LQ9BY27 220 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 GABARAPL3Q9BY60 117 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 SLC25A18Q9H1K4 315 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ADNPQ9H2P0 1102 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 MED20Q9H944 212 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 C12orf10Q9HB07 376 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 SERINC1Q9NRX5 453 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 MED29Q9NX70 200 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ALKBH4Q9NXW9 302 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 TAS2R5Q9NYW4 299 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 B3GAT1Q9P2W7 334 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 ZNF346Q9UL40 294 aaKnown RBP4.65□□□□□ -1.67
SPG11-220ENST00000559933 MGAT4BQ9UQ53 548 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 POFUT2Q9Y2G5 429 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 GPR52Q9Y2T5 361 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 PCDHGB6Q9Y5F9 930 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 AP4B1Q9Y6B7 739 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 CDH10Q9Y6N8 788 aa4.65□□□□□ -1.67
SPG11-220ENST00000559933 DNAJC13O75165 2243 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms