RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 PCGF2P35227 344 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 IDH3GP51553 393 aaPredicted RBP15.39■□□□□ 0.05
HDDC3-205ENST00000559898 UBE2NP61088 152 aaKnown RBP15.39■□□□□ 0.05
HDDC3-205ENST00000559898 PPP2R2BQ00005 443 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 PMS2P3Q13401 168 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 ADIPOQQ15848 244 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 MSMPQ1L6U9 139 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 MDP1Q86V88 176 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 UEVLDQ8IX04 471 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 C20orf196Q8IYI0 205 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 GPR137CQ8N3F9 429 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 C10orf53Q8N6V4 93 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 MAGEE2Q8TD90 523 aaPredicted RBP15.39■□□□□ 0.05
HDDC3-205ENST00000559898 RHNO1Q9BSD3 238 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 BARX1Q9HBU1 254 aaPredicted RBP15.39■□□□□ 0.05
HDDC3-205ENST00000559898 FGFR1OP2Q9NVK5 253 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 ZNF224Q9NZL3 707 aa15.39■□□□□ 0.05
HDDC3-205ENST00000559898 LOC102725191A0A1B0GVB3 256 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 CD5LO43866 347 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 CRLF1O75462 422 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 IGKV3-15P01624 115 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 HLA-HP01893 362 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 IGFBP1P08833 259 aaPredicted RBP15.38■□□□□ 0.05
HDDC3-205ENST00000559898 RBBP4Q09028 425 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 NPRL3Q12980 569 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 RANBP3LQ86VV4 465 aaPredicted RBP15.38■□□□□ 0.05
HDDC3-205ENST00000559898 CALHM3Q86XJ0 350 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 ZCCHC24Q8N2G6 241 aaKnown RBP15.38■□□□□ 0.05
HDDC3-205ENST00000559898 ADPRHL1Q8NDY3 354 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 FGFBP3Q8TAT2 258 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 C10orf105Q8TEF2 133 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 MS4A3Q96HJ5 214 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 ZNF75AQ96N20 296 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 PRSS27Q9BQR3 290 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 TMEM43Q9BTV4 400 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 YAE1D1Q9NRH1 226 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 CA10Q9NS85 328 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 MRPL39Q9NYK5 338 aaKnown RBP15.38■□□□□ 0.05
HDDC3-205ENST00000559898 TAS2R5Q9NYW4 299 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 SLC13A4Q9UKG4 626 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 SLC7A7Q9UM01 511 aa15.38■□□□□ 0.05
HDDC3-205ENST00000559898 OR6C65A6NJZ3 312 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 CH25HO95992 272 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 PATE4P0C8F1 98 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 CBR1P16152 277 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 AHCYP23526 432 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 THBS4P35443 961 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 PIGFQ07326 219 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 PUDPQ08623 228 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 KLF10Q13118 480 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 MELKQ14680 651 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 VMACQ2NL98 169 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 REP15Q6BDI9 236 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 C5orf46Q6UWT4 87 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 OR6S1Q8NH40 331 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 ADAMTS16Q8TE57 1224 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 KATNB1Q9BVA0 655 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 ASPNQ9BXN1 380 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 OBP2BQ9NPH6 170 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 ARGLU1Q9NWB6 273 aaPredicted RBP15.37■□□□□ 0.05
HDDC3-205ENST00000559898 B3GNT2Q9NY97 397 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 SELENONQ9NZV5 590 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 TRIM33Q9UPN9 1127 aa15.37■□□□□ 0.05
HDDC3-205ENST00000559898 IGHV2OR16-5A0A0B4J2B6 119 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 TMEM129A0AVI4 362 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 ZNF99A8MXY4 864 aaPredicted RBP15.36■□□□□ 0.05
HDDC3-205ENST00000559898 CHP2O43745 196 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 OR4A8P0C604 315 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 ADORA3P0DMS8 318 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 IFNGR1P15260 489 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 B4GALT1P15291 398 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 CAPZA2P47755 286 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 EFNA4P52798 201 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 BIDP55957 195 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 MFSD13AQ14CX5 517 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 ZNF74Q16587 644 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 TRMT5Q32P41 509 aaKnown RBP15.36■□□□□ 0.05
HDDC3-205ENST00000559898 ZNF613Q6PF04 617 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 CLEC2AQ6UVW9 174 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 SLC46A3Q7Z3Q1 461 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 NKAIN4Q8IVV8 208 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 SCAIQ8N9R8 606 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 PIK3C3Q8NEB9 887 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 BHLHE22Q8NFJ8 381 aaPredicted RBP15.36■□□□□ 0.05
HDDC3-205ENST00000559898 OR5J2Q8NH18 312 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 PFN4Q8NHR9 129 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 TSPEARQ8WU66 669 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 FAM168AQ92567 244 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 EPYCQ99645 322 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 MEPEQ9NQ76 525 aaPredicted RBP15.36■□□□□ 0.05
HDDC3-205ENST00000559898 SAR1AQ9NR31 198 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 CORINQ9Y5Q5 1042 aa15.36■□□□□ 0.05
HDDC3-205ENST00000559898 LOC100653049A0A140TA62 436 aa15.35■□□□□ 0.05
HDDC3-205ENST00000559898 FMO6PO60774 539 aa15.35■□□□□ 0.05
HDDC3-205ENST00000559898 KRT34O76011 436 aa15.35■□□□□ 0.05
HDDC3-205ENST00000559898 F12P00748 615 aaPredicted RBP15.35■□□□□ 0.05
HDDC3-205ENST00000559898 CRYAAP02489 173 aa15.35■□□□□ 0.05
HDDC3-205ENST00000559898 C8BP07358 591 aa15.35■□□□□ 0.05
HDDC3-205ENST00000559898 SERPINF1P36955 418 aa15.35■□□□□ 0.05
HDDC3-205ENST00000559898 SH3BGRP55822 239 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms