RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 HEATR1Q9H583 2144 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 LOC102725191A0A1B0GVB3 256 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 SHISA9B4DS77 424 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 BLOC1S5-TXNDC5H3BN57 136 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 FFAR1O14842 300 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 SMPD2O60906 423 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 DCTN3O75935 186 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 OR7A10O76100 309 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 MT-ND1P03886 318 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 IFNW1P05000 195 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 IFNGR1P15260 489 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 CD40P25942 277 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 HOXC12P31275 282 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 BIDP55957 195 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 ADAM8P78325 824 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 IFI44LQ53G44 452 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 GLYATQ6IB77 296 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 FKBP9P1Q75LS8 142 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 ABHD12BQ7Z5M8 362 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 TSEN54Q7Z6J9 526 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 C17orf78Q8N4C9 275 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 FAM86B1Q8N7N1 296 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF611Q8N823 705 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 PIK3C3Q8NEB9 887 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 WFDC11Q8NEX6 87 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 CRLF2Q9HC73 371 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 MAN2C1Q9NTJ4 1040 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF229Q9UJW7 825 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 LAMP3Q9UQV4 416 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 AMDHD2Q9Y303 409 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 MED13LQ71F56 2210 aa12.98□□□□□ -0.33
RABGGTA-211ENST00000559850 HIVEP1P15822 2718 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF726A6NNF4 738 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 RNF13O43567 381 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 AKAP8O43823 692 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 HIST1H2ABP04908 130 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 F13BP05160 661 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 SOD3P08294 240 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 ASAH2BP0C7U1 165 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 CDH11P55287 796 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 PRPS1P60891 318 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 NKX6-1P78426 367 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 MXRA7P84157 204 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 KLHL17Q6TDP4 642 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 KLHL24Q6TFL4 600 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 TMEM108Q6UXF1 575 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 SLC35D2Q76EJ3 337 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 HIST3H2AQ7L7L0 130 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 PXKQ7Z7A4 578 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 FITM2Q8N6M3 262 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 MOSPD2Q8NHP6 518 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 IGFBPL1Q8WX77 278 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 GEMIN6Q8WXD5 167 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 HIST1H2ACQ93077 130 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 PIGTQ969N2 578 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 FBXW5Q969U6 566 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 CDRT15Q96T59 188 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 SLC19A3Q9BZV2 496 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 POLR2J2Q9GZM3 115 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 POLR2J3Q9H1A7 115 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 SEC61A2Q9H9S3 476 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 CISD1Q9NZ45 108 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 MED31Q9Y3C7 131 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 ITPR3Q14573 2671 aa12.97□□□□□ -0.33
RABGGTA-211ENST00000559850 F8P00451 2351 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 ALPK2Q86TB3 2170 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 ZNF503-AS2A6NEH8 195 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 OR6C65A6NJZ3 312 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 E7EQL1 145 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 NDUFAB1O14561 156 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 IFI30P13284 250 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 AQP2P41181 271 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 UBE2NP61088 152 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 RPL18Q07020 188 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 ST3GAL3Q11203 375 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 ZP4Q12836 540 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 Q5PR19 223 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 ANKRD16Q6P6B7 361 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 SLC22A25Q6T423 547 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 TGIF2LYQ8IUE0 185 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 DEFB107AQ8IZN7 70 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 PGAM4Q8N0Y7 254 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 OR6N1Q8NGY5 312 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 HTRA1Q92743 480 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 FNDC11Q9BVV2 318 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 FAM53CQ9NYF3 392 aa12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 MAGED1Q9Y5V3 778 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 TEP1Q99973 2627 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-211ENST00000559850 IGHV1-18A0A0C4DH31 117 aa12.95□□□□□ -0.34
RABGGTA-211ENST00000559850 ATP6V1G2-DDX39BF2Z307 99 aa12.95□□□□□ -0.34
RABGGTA-211ENST00000559850 RPL36A-HNRNPH2H7BZ11 118 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms