RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 SAC3D1A6NKF1 404 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 ZNF716A6NP11 495 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 XKRYO14609 159 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 CDC42EP2O14613 210 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 IMPA2O14732 288 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 KLF4O43474 513 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 AHCYL1O43865 530 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 SLC43A1O75387 559 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 KRT33AO76009 404 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 CNOT4O95628 575 aaKnown RBP8.21□□□□□ -1.1
LDLR-210ENST00000559340 OSMP13725 252 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 APEHP13798 732 aaKnown RBP8.21□□□□□ -1.1
LDLR-210ENST00000559340 FUT4P22083 530 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 PRKACGP22612 351 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 AGTR1P30556 359 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 UQCRFS1P47985 274 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 P2RY4P51582 365 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 CLDN17P56750 224 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 ESRRGP62508 458 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 POU3F1Q03052 451 aaPredicted RBP8.21□□□□□ -1.1
LDLR-210ENST00000559340 SLC34A1Q06495 639 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 DAG1Q14118 895 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 FAHD1Q6P587 224 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 SEM1Q6ZVN7 128 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 KDM8Q8N371 416 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 ZNF808Q8N4W9 903 aaPredicted RBP8.21□□□□□ -1.1
LDLR-210ENST00000559340 POMGNT2Q8NAT1 580 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 APH1AQ96BI3 265 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 POLDIP3Q9BY77 421 aaKnown RBP8.21□□□□□ -1.1
LDLR-210ENST00000559340 PRRG3Q9BZD7 231 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 OR52D1Q9H346 318 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 TXNIPQ9H3M7 391 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 RNPEPL1Q9HAU8 725 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 PLSCR4Q9NRQ2 329 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 KRT84Q9NSB2 600 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 IL20Q9NYY1 176 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 GRHPRQ9UBQ7 328 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 UPB1Q9UBR1 384 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 Q9UFV3 132 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 OAZ3Q9UMX2 235 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 RNF6Q9Y252 685 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 PTPN13Q12923 2485 aa8.21□□□□□ -1.1
LDLR-210ENST00000559340 HCFC1P51610 2035 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 ZNF814B7Z6K7 855 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 H3BN98 237 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 MSTNO14793 375 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 MGRN1O60291 552 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 SERPINI2O75830 405 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 TOXO94900 526 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 AGFG2O95081 481 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 HPRP00739 348 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 IFNGP01579 166 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 IGHG1P01857 330 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 IGHMP01871 453 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 HMGN1P05114 100 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 F13BP05160 661 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 CD8BP10966 210 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 IFNGR1P15260 489 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 IGFBP5P24593 272 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 NOS3P29474 1203 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 KIR2DL2P43627 348 aaPredicted RBP8.2□□□□□ -1.1
LDLR-210ENST00000559340 OR3A2P47893 321 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 ALDH3A2P51648 485 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 RPL27P61353 136 aaKnown RBP8.2□□□□□ -1.1
LDLR-210ENST00000559340 SIRPAP78324 504 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
LDLR-210ENST00000559340 GUSBP1Q15486 140 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 TRIP10Q15642 601 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 KDM4DQ6B0I6 523 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 NIPAL3Q6P499 406 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 CASP12Q6UXS9 341 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 ZNF620Q6ZNG0 422 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 MRGPRGQ86SM5 289 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 MEX3DQ86XN8 651 aaKnown RBP8.2□□□□□ -1.1
LDLR-210ENST00000559340 EPHX4Q8IUS5 362 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 GCNT2Q8N0V5 402 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 PARP8Q8N3A8 854 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 MARVELD2Q8N4S9 558 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 PACRGLQ8N7B6 248 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 OR6X1Q8NH79 312 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 LILRB4Q8NHJ6 448 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 MOSPD2Q8NHP6 518 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 CA5BP1Q8WTZ4 195 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 SLC25A44Q96H78 314 aaPredicted RBP8.2□□□□□ -1.1
LDLR-210ENST00000559340 CCDC120Q96HB5 630 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 LRR1Q96L50 414 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 SAMD8Q96LT4 415 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 RDH12Q96NR8 316 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 RBP7Q96R05 134 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 GPX7Q96SL4 187 aaPredicted RBP8.2□□□□□ -1.1
LDLR-210ENST00000559340 CIB1Q99828 191 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 ALG12Q9BV10 488 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 IFT27Q9BW83 186 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 TSSK6Q9BXA6 273 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 RASSF4Q9H2L5 321 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 SLCO5A1Q9H2Y9 848 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 MCCC2Q9HCC0 563 aa8.2□□□□□ -1.1
LDLR-210ENST00000559340 KCNJ16Q9NPI9 418 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms