RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NRG4Q8WWG1 115 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 STARD4Q96DR4 205 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 CCDC120Q96HB5 630 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 C9orf16Q9BUW7 83 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 RBM4Q9BWF3 364 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 SFXN3Q9BWM7 321 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 GABARAPL3Q9BY60 117 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF629Q9UEG4 869 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 FOXD3Q9UJU5 478 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 POFUT2Q9Y2G5 429 aa13.14□□□□□ -0.31
SNRPA1-207ENST00000559309 SPTBN1Q01082 2364 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 HSPB2A8KAH6 182 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 CENPBD1B2RD01 187 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 H0YHG0 523 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 CCL21O00585 134 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 EI24O14681 340 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 IMPA2O14732 288 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 ATP6V1G2O95670 118 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 BAG2O95816 211 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 IL2RAP01589 272 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 HIST1H2ABP04908 130 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 CD14P08571 375 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 IGFBP1P08833 259 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 CD8BP10966 210 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 EDNRAP25101 427 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 CTSSP25774 331 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 GTF2E2P29084 291 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 CASP6P55212 293 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 CDK5Q00535 292 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 HSPB2Q16082 182 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF362Q5T0B9 420 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 EEF1A1P5Q5VTE0 462 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 DPY19L2P2Q6ZN68 376 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 HIST3H2AQ7L7L0 130 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 NUFIP2Q7Z417 695 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 ICA1LQ8NDH6 482 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 OR6K3Q8NGY3 331 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 HIST1H2ACQ93077 130 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 TXNDC15Q96J42 360 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 DDOQ99489 341 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 MRPL13Q9BYD1 178 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 TXNIPQ9H3M7 391 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 EGLN3Q9H6Z9 239 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 C8orf4Q9NR00 106 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 PLSCR4Q9NRQ2 329 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 INIPQ9NRY2 104 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
SNRPA1-207ENST00000559309 LRRTM2O43300 516 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 MITFO75030 526 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 TMIGD3P0DMS9 266 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ZNF43P17038 809 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 AGAP20933 346 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 PEX2P28328 305 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 OR3A2P47893 321 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 PCYT1AP49585 367 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ESRRGP62508 458 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 POU3F1Q03052 451 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ACKR1Q16570 336 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 SLC35D2Q76EJ3 337 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 P4HA3Q7Z4N8 544 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 LIX1LQ8IVB5 337 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 UEVLDQ8IX04 471 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 GCNT2Q8N0V5 402 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 LNX2Q8N448 690 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ATG16L2Q8NAA4 619 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 OR6X1Q8NH79 312 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 FANK1Q8TC84 345 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ASB10Q8WXI3 467 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 INTS12Q96CB8 462 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 LRR1Q96L50 414 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 SAMD8Q96LT4 415 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 TSPAN32Q96QS1 320 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 OR2M2Q96R28 347 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 PRRG4Q9BZD6 226 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 PAPOLBQ9NRJ5 636 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ERRFI1Q9UJM3 462 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 RNF6Q9Y252 685 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 FREM1Q5H8C1 2179 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 NBPF19A0A087WUL8 3843 aa13.12□□□□□ -0.31
SNRPA1-207ENST00000559309 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 RNF13O43567 381 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 IDH3BO43837 385 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 CNOT4O95628 575 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 F13BP05160 661 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 PGA4P0DJD7 388 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 PGA3P0DJD8 388 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 IFNGR1P15260 489 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 EPHA2P29317 976 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 SLC6A6P31641 620 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 CRISP1P54107 249 aa13.11□□□□□ -0.31
SNRPA1-207ENST00000559309 CTXN1P60606 82 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms