RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 H2AFVQ71UI9 128 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 PNKDQ8N490 385 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 SDR9C7Q8NEX9 313 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 VN1R2Q8NFZ6 395 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 OR10G9Q8NGN4 311 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 OR2G2Q8NGZ5 317 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 SLC35E1Q96K37 410 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 MBOAT4Q96T53 435 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 ANP32EQ9BTT0 268 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 OR11A1Q9GZK7 315 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 ADAP2Q9NPF8 381 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 NUFIP1Q9UHK0 495 aaKnown RBP3.13□□□□□ -1.91
CASC4-206ENST00000558847 GNPTGQ9UJJ9 305 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 MMP17Q9ULZ9 603 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 CAB39Q9Y376 341 aaPredicted RBP3.13□□□□□ -1.91
CASC4-206ENST00000558847 CSDC2Q9Y534 153 aaKnown RBP3.13□□□□□ -1.91
CASC4-206ENST00000558847 SLC25A15Q9Y619 301 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 FRMPD3Q5JV73 1810 aa3.13□□□□□ -1.91
CASC4-206ENST00000558847 NSD2O96028 1365 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 USP47Q96K76 1375 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 A0A0B4J2A0 478 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 TRBV11-1A0A0K0K1C0 115 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 C12orf77C9JDV5 145 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 GOSR2O14653 212 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 SLC31A2O15432 143 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 SUPT7LO94864 414 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 IGHV2-5P01817 119 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 UBTFL1P0CB47 393 aaPredicted RBP3.12□□□□□ -1.91
CASC4-206ENST00000558847 SFTPCP11686 197 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 RORAP35398 523 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 SYKP43405 635 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 PRRX1P54821 245 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 NUP107P57740 925 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 RGS8P57771 180 aaPredicted RBP3.12□□□□□ -1.91
CASC4-206ENST00000558847 ZNF620Q6ZNG0 422 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 MFSD6LQ8IWD5 586 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 PIANPQ8IYJ0 282 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 FBXL16Q8N461 479 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 ZNF557Q8N988 423 aaPredicted RBP3.12□□□□□ -1.91
CASC4-206ENST00000558847 B3GNT7Q8NFL0 401 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 FAM110BQ8TC76 370 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 TSEN15Q8WW01 171 aaKnown RBP3.12□□□□□ -1.91
CASC4-206ENST00000558847 DCUN1D4Q92564 292 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 FRAT1Q92837 279 aaPredicted RBP3.12□□□□□ -1.91
CASC4-206ENST00000558847 FCRL1Q96LA6 429 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 MS4A4EQ96PG1 132 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 TGS1Q96RS0 853 aaKnown RBP3.12□□□□□ -1.91
CASC4-206ENST00000558847 TMEM59Q9BXS4 323 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 EXO5Q9H790 373 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 NANOGQ9H9S0 305 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 CALYQ9NYX4 217 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 SHPKQ9UHJ6 478 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 TMED5Q9Y3A6 229 aa3.12□□□□□ -1.91
CASC4-206ENST00000558847 LRRK1Q38SD2 2015 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 FAM189A1O60320 539 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 KLF8O95600 359 aaPredicted RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 FTH1P02794 183 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 RBMY1A1P0DJD3 496 aaKnown RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 GALP22466 123 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 SLC26A3P40879 764 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 SUB1P53999 127 aaKnown RBP eCLIP3.11□□□□□ -1.91
CASC4-206ENST00000558847 CDH6P55285 790 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 SH3BGRP55822 239 aaPredicted RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 PRPS1P60891 318 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 ENPEPQ07075 957 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 ZNF79Q15937 498 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 COA6Q5JTJ3 125 aaKnown RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 LRRC66Q68CR7 880 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 C1orf94Q6P1W5 598 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 C6orf89Q6UWU4 347 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 BZW1Q7L1Q6 419 aaKnown RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 TGIF2LYQ8IUE0 185 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 LINC01555Q8NAE3 123 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 RHEBL1Q8TAI7 183 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 FAM81AQ8TBF8 368 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 PLPPR1Q8TBJ4 325 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 FANK1Q8TC84 345 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 FAM151AQ8WW52 585 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 ELMO1Q92556 727 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 SH3GL3Q99963 347 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 MTG1Q9BT17 334 aaPredicted RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 HES7Q9BYE0 225 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 RNF167Q9H6Y7 350 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 ASB8Q9H765 288 aa3.11□□□□□ -1.91
CASC4-206ENST00000558847 MTRF1LQ9UGC7 380 aaKnown RBP3.11□□□□□ -1.91
CASC4-206ENST00000558847 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.11□□□□□ -1.91
CASC4-206ENST00000558847 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 CDH16O75309 829 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 PABPC4LP0CB38 370 aaKnown RBP3.1□□□□□ -1.91
CASC4-206ENST00000558847 ZNF43P17038 809 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 GPR6P46095 362 aaPredicted RBP3.1□□□□□ -1.91
CASC4-206ENST00000558847 NPBWR2P48146 333 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 RFX3P48380 749 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 SSR4P51571 173 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 C21orf59P57076 290 aa3.1□□□□□ -1.91
CASC4-206ENST00000558847 RAB10P61026 200 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms