RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 IGHV4-30-2A0A087WSY4 118 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ARPC4-TTLL3A0A0A6YYG9 625 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 PRORSD1PA6NEY8 169 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 A8MV72 311 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 OR2T1O43869 369 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 FZD7O75084 574 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 SLC43A1O75387 559 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 PDE5AO76074 875 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 CRYAAP02489 173 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF43P17038 809 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 APOBEC3AP31941 199 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 RPS5P46782 204 aaKnown RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 EFNA4P52798 201 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 RGS8P57771 180 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 C1DQ13901 141 aaKnown RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 MFSD13AQ14CX5 517 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 TMEM249Q2WGJ8 235 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 C3orf36Q3SXR2 165 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 TMEM177Q53S58 311 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 BEND6Q5SZJ8 279 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 REEP3Q6NUK4 255 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ANKRD16Q6P6B7 361 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 DHRS4L2Q6PKH6 230 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 SHISA2Q6UWI4 295 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 LINC00114Q6XXX2 140 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 CREB3L2Q70SY1 520 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF525Q8N782 197 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 LSMEM1Q8N8F7 131 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ADPRHL1Q8NDY3 354 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 NFKBIDQ8NI38 313 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 MAGEE2Q8TD90 523 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 DNAJA4Q8WW22 397 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 DYDC1Q8WWB3 177 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 SLC25A36Q96CQ1 311 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 SPDL1Q96EA4 605 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ZNF607Q96SK3 696 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 EPYCQ99645 322 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 CCDC28BQ9BUN5 200 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 PTDSS2Q9BVG9 487 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 EVA1AQ9H8M9 152 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 MYOZ1Q9NP98 299 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 EMC7Q9NPA0 242 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 CCDC167Q9P0B6 97 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 FBXO9Q9UK97 447 aaPredicted RBP7.03□□□□□ -1.28
TRAF3-205ENST00000558700 SLC13A4Q9UKG4 626 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 MOKQ9UQ07 419 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 ANGPT4Q9Y264 503 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 CHST2Q9Y4C5 530 aa7.03□□□□□ -1.28
TRAF3-205ENST00000558700 TRAV36DV7A0A075B6V5 113 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 A0A096LNT2 108 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 IGHV1-18A0A0C4DH31 117 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 A0A1B0GWA3 101 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 EVPLLA8MZ36 301 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 FTCDNL1E5RQL4 147 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 NDUFS8O00217 210 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 IFNA2P01563 188 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 ATP4BP51164 291 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 CLDN17P56750 224 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 VLDLRP98155 873 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 HOXC5Q00444 222 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 CDK6Q00534 326 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 IL1RL1Q01638 556 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 ROR2Q01974 943 aaKnown RBP7.02□□□□□ -1.29
TRAF3-205ENST00000558700 NAAAQ02083 359 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 EGR4Q05215 589 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 LOXL1Q08397 574 aaPredicted RBP7.02□□□□□ -1.29
TRAF3-205ENST00000558700 SCARB2Q14108 478 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 SQLEQ14534 574 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 ALG10BQ5I7T1 473 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 C6orf52Q5T4I8 152 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 FAM91A1Q658Y4 838 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 ULK3Q6PHR2 472 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 Q6ZS46 218 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 SLC46A3Q7Z3Q1 461 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 RANBP3LQ86VV4 465 aaPredicted RBP7.02□□□□□ -1.29
TRAF3-205ENST00000558700 EPHX4Q8IUS5 362 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 GPR137CQ8N3F9 429 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 SVOPQ8N4V2 548 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 PIK3C3Q8NEB9 887 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 BHLHE22Q8NFJ8 381 aaPredicted RBP7.02□□□□□ -1.29
TRAF3-205ENST00000558700 OR10H5Q8NGA6 315 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 OR6S1Q8NH40 331 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 C10orf105Q8TEF2 133 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 HTRA1Q92743 480 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 FBXO17Q96EF6 278 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 KTI12Q96EK9 354 aaPredicted RBP7.02□□□□□ -1.29
TRAF3-205ENST00000558700 FAM46AQ96IP4 442 aaKnown RBP7.02□□□□□ -1.29
TRAF3-205ENST00000558700 ATP6V1G3Q96LB4 118 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 OXGR1Q96P68 337 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 TNFRSF13CQ96RJ3 184 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 RABEP2Q9H5N1 569 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 TMEM38AQ9H6F2 299 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 SLCO1B3Q9NPD5 702 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 CA10Q9NS85 328 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 SLC25A37Q9NYZ2 338 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 B3GAT1Q9P2W7 334 aa7.02□□□□□ -1.29
TRAF3-205ENST00000558700 CRNNQ9UBG3 495 aaPredicted RBP7.02□□□□□ -1.29
TRAF3-205ENST00000558700 ADAM21Q9UKJ8 722 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms