RNA–Protein interactions for RNA: ENST00000558528.1

LDLR-209, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-209ENST00000558528 PAPOLBQ9NRJ5 636 aaKnown RBP4.65□□□□□ -1.67
LDLR-209ENST00000558528 HAO2Q9NYQ3 351 aa4.65□□□□□ -1.67
LDLR-209ENST00000558528 TAS2R3Q9NYW6 316 aa4.65□□□□□ -1.67
LDLR-209ENST00000558528 RIMS3Q9UJD0 308 aa4.65□□□□□ -1.67
LDLR-209ENST00000558528 RABL2BQ9UNT1 228 aa4.65□□□□□ -1.67
LDLR-209ENST00000558528 CELSR1Q9NYQ6 3014 aa4.65□□□□□ -1.67
LDLR-209ENST00000558528 BSNQ9UPA5 3926 aa4.65□□□□□ -1.67
LDLR-209ENST00000558528 ZFC3H1O60293 1989 aaKnown RBP4.65□□□□□ -1.67
LDLR-209ENST00000558528 DSPPQ9NZW4 1301 aa4.65□□□□□ -1.67
LDLR-209ENST00000558528 SPTBN1Q01082 2364 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 EML5Q05BV3 1969 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 A0A1W2PQ72 361 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 A0A1W2PQD3 144 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ARRDC5A6NEK1 342 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 CBY3A6NI87 242 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 OR6C70A6NIJ9 312 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 MARCH11A6NNE9 402 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 A8MUA0 341 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 NPIPB11E5RHQ5 1161 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TP53I11O14683 189 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 KIAA0513O60268 411 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TPST1O60507 370 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 EIF4E2O60573 245 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 RAD1O60671 282 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 UGT2B11O75310 529 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 JRKO75564 520 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 GCM2O75603 506 aaPredicted RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 REM1O75628 298 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 UGT2B17O75795 530 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TNFSF15O95150 251 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 OR5F1O95221 314 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 GADD45GO95257 159 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 HPP00738 406 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SEMG1P04279 462 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 H1F0P07305 194 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 CT45A8P0DMV1 189 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 CT45A9P0DMV2 189 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 FCGR2AP12318 317 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 GSTM3P21266 225 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TBXA2RP21731 343 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ACHEP22303 614 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 FKBP2P26885 142 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 ITPKBP27987 946 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 PEX19P40855 299 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SLC6A8P48029 635 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ERFP50548 548 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ZNF81P51508 661 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 LUMP51884 338 aaPredicted RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 PDX1P52945 283 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 CASP9P55211 416 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SLC26A5P58743 744 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 COPZ1P61923 177 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SIRPAP78324 504 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 MRPS34P82930 218 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 COX10Q12887 443 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 EXOSC7Q15024 291 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 ZNF141Q15928 474 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 INAQ16352 499 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 DUSP7Q16829 419 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 CT45A2Q5DJT8 189 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 PLAC9Q5JTB6 97 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 DCST1Q5T197 706 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 C1QL3Q5VWW1 255 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TYW3Q6IPR3 259 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 OPN5Q6U736 354 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ENPP6Q6UWR7 440 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 FRRS1Q6ZNA5 592 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 Q6ZWC4 215 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 AMIGO2Q86SJ2 522 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TBC1D26Q86UD7 250 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 CARM1Q86X55 608 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ANKRD13BQ86YJ7 626 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 GPALPP1Q8IXQ4 340 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 PRSS58Q8IYP2 241 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 CDK20Q8IZL9 346 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 RNF113BQ8IZP6 322 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 C10orf111Q8N326 155 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 DHRSXQ8N5I4 330 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SMYD1Q8NB12 490 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SLC38A9Q8NBW4 561 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 FAM110DQ8TAY7 271 aaPredicted RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 GIPC3Q8TF64 312 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TSLPQ969D9 159 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 TMBIM1Q969X1 311 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ADIPOR1Q96A54 375 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 RMND5BQ96G75 393 aaPredicted RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 C7orf34Q96L11 122 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ZNF597Q96LX8 424 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 PRRC1Q96M27 445 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 OR14A2Q96R54 314 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 GAL3ST4Q96RP7 486 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SECISBP2Q96T21 854 aaKnown RBP4.64□□□□□ -1.67
LDLR-209ENST00000558528 ARHGDIGQ99819 225 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 ZNF559Q9BR84 538 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 DEFB126Q9BYW3 111 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SPRY4Q9C004 299 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 SEMA6AQ9H2E6 1030 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 COQ10BQ9H8M1 238 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 MMP25Q9NPA2 562 aa4.64□□□□□ -1.67
LDLR-209ENST00000558528 CHCHD3Q9NX63 227 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms