RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 ADPRHL2Q9NX46 363 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 TAS2R16Q9NYV7 291 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 ST6GALNAC2Q9UJ37 374 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 MGAT4BQ9UQ53 548 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 RELNP78509 3460 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 CREBBPQ92793 2442 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 TRAV36DV7A0A075B6V5 113 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 IGHV3-15A0A0B4J1V0 119 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 LOC105371267A0A1B0GV96 52 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 FAM221AA4D161 298 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 LIPT2A6NK58 231 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 AQP7P3A6NL99 342 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 H3BMQ9 156 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 EFNA2O43921 213 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 CLPXO76031 633 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 STAMBPO95630 424 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 WNT11O96014 354 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 ADAP00813 363 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 MT-ATP6P00846 226 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 HIST1H2ABP04908 130 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 CD3EP07766 207 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 ZNF43P17038 809 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 HOXB9P17482 250 aaPredicted RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 AQP1P29972 269 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 ACAA2P42765 397 aaKnown RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 CTAG1AP78358 180 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 NPTX1Q15818 432 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 TIMM23BQ5SRD1 257 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 REP15Q6BDI9 236 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 PLXDC2Q6UX71 529 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 PAMR1Q6UXH9 720 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 STAC2Q6ZMT1 411 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 HIST3H2AQ7L7L0 130 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 AAED1Q7RTV5 226 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 HDDC2Q7Z4H3 204 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 GPAT4Q86UL3 456 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 CXorf67Q86X51 503 aaPredicted RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 WFDC8Q8IUA0 241 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 CLIP4Q8N3C7 705 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 C1orf162Q8NEQ5 155 aaPredicted RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 OR2T12Q8NG77 320 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 OR10A6Q8NH74 314 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 HIST1H2ACQ93077 130 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 GTPBP3Q969Y2 492 aaKnown RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 TMEM45BQ96B21 275 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 ZC3HAV1LQ96H79 300 aaKnown RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 COG8Q96MW5 612 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 FOXC2Q99958 501 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 SLC19A3Q9BZV2 496 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 OR11A1Q9GZK7 315 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 OBP2BQ9NPH6 170 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 SLC52A3Q9NQ40 469 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 BEX4Q9NWD9 120 aaPredicted RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 SLAMF8Q9P0V8 285 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 RABL2AQ9UBK7 228 aaPredicted RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 DAPK2Q9UIK4 370 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 FBXO9Q9UK97 447 aaPredicted RBP7.69□□□□□ -1.18
USP3-208ENST00000558285 COL12A1Q99715 3063 aa7.69□□□□□ -1.18
USP3-208ENST00000558285 HCFC1P51610 2035 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 LOC100653049A0A140TA62 436 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 VSTM5A8MXK1 200 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 CLDN25C9JDP6 229 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 ZNF587BE7ETH6 402 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 KRT34O76011 436 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 ALX3O95076 343 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 MFN2O95140 757 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 CRYZL1O95825 349 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 HRGP04196 525 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 BMP4P12644 408 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 NR2C1P13056 603 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 ART1P52961 327 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 GNG2P59768 71 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 H3F3AP84243 136 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 SLC25A3Q00325 362 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 SELPLGQ14242 412 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 C6orf52Q5T4I8 152 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 TTC33Q6PID6 262 aaPredicted RBP7.68□□□□□ -1.18
USP3-208ENST00000558285 ATG4DQ86TL0 474 aaPredicted RBP7.68□□□□□ -1.18
USP3-208ENST00000558285 MSRB3Q8IXL7 192 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 GABRG1Q8N1C3 465 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 ADPRHL1Q8NDY3 354 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 RAB2BQ8WUD1 216 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 GIMAP1Q8WWP7 306 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 C3orf49Q96BT1 292 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 S100PBPQ96BU1 408 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 SLC25A36Q96CQ1 311 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 MBD6Q96DN6 1003 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 NRBF2Q96F24 287 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 DUS3LQ96G46 650 aaKnown RBP7.68□□□□□ -1.18
USP3-208ENST00000558285 ARL5BQ96KC2 179 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 ALPK1Q96QP1 1244 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 MCHR1Q99705 422 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 NPAS1Q99742 590 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 KCNS3Q9BQ31 491 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 TMEM43Q9BTV4 400 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 SP140LQ9H930 580 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 NANOGQ9H9S0 305 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 RCE1Q9Y256 329 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 AMDHD2Q9Y303 409 aa7.68□□□□□ -1.18
USP3-208ENST00000558285 CACNA1DQ01668 2161 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms