RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 OR52N5Q8NH56 324 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 SMAP2Q8WU79 429 aaPredicted RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 THRSPQ92748 146 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 NTAN1Q96AB6 310 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 C11orf24Q96F05 449 aaPredicted RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 PAGE5Q96GU1 130 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 CYTH2Q99418 400 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 RBM4BQ9BQ04 359 aaKnown RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 SFXN3Q9BWM7 321 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 CARD6Q9BX69 1037 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 SPATA16Q9BXB7 569 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 SPHK1Q9NYA1 384 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 STOX2Q9P2F5 926 aaPredicted RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 PTBP2Q9UKA9 531 aaKnown RBP4.77□□□□□ -1.65
RTF1-204ENST00000558117 U3KQV3 271 aa4.77□□□□□ -1.65
RTF1-204ENST00000558117 ATP6AP2A0A1C7CYW4 349 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 MSGN1A6NI15 193 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 ARHGAP42A6NI28 874 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 PDXKO00764 312 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 CASQ2O14958 399 aaPredicted RBP4.76□□□□□ -1.65
RTF1-204ENST00000558117 CTDSPLO15194 276 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 ATP6AP2O75787 350 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 DFFBO76075 338 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 KRT6BP04259 564 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 KRT8P05787 483 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 NUDT17P0C025 328 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 FUT1P19526 365 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 UGT2B10P36537 528 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 KRT6CP48668 564 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 SLC10A7Q0GE19 358 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 TMED1Q13445 227 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 GGTLC2Q14390 218 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 HERC3Q15034 1050 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 PGGHGQ32M88 737 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 KCTD11Q693B1 232 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 PDPK2PQ6A1A2 396 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 PRR27Q6MZM9 219 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 C11orf63Q6NUN7 778 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 ZYG11AQ6WRX3 759 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 WDR88Q6ZMY6 472 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 Q6ZSR9 355 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 CYP4Z2PQ8N1L4 340 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 TRAM1L1Q8N609 369 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 GPR26Q8NDV2 337 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 OR56B2PQ8NGI1 322 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 METTL21AQ8WXB1 218 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 THOC1Q96FV9 657 aaKnown RBP4.76□□□□□ -1.65
RTF1-204ENST00000558117 C10orf90Q96M02 699 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 ZNF599Q96NL3 588 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 LYSMD1Q96S90 227 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 ZSCAN5AQ9BUG6 496 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 SLC39A8Q9C0K1 460 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 OR2B2Q9GZK3 357 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 NCOR1P1Q9H4R4 102 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 IL1RL2Q9HB29 575 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 GPN1Q9HCN4 374 aaPredicted RBP4.76□□□□□ -1.65
RTF1-204ENST00000558117 ZDHHC18Q9NUE0 388 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 PLCXD1Q9NUJ7 323 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 NMRK1Q9NWW6 199 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 PKD2L2Q9NZM6 624 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 GPR132Q9UNW8 380 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 DNAH10Q8IVF4 4471 aa4.76□□□□□ -1.65
RTF1-204ENST00000558117 PRR14LQ5THK1 2151 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 CCT8L1PA6NM43 557 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 PES1O00541 588 aaKnown RBP4.75□□□□□ -1.65
RTF1-204ENST00000558117 SSX5O60225 188 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 ZFAND5O76080 213 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 SBK2P0C263 348 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 SPP1P10451 314 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 CD22P20273 847 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 MAGP20916 626 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 CD79BP40259 229 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 SLC26A3P40879 764 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 RPL21P46778 160 aaKnown RBP4.75□□□□□ -1.65
RTF1-204ENST00000558117 MAPK11Q15759 364 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 SPATA46Q5T0L3 261 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 ASPHD2Q6ICH7 369 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 ANKRD37Q7Z713 158 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 LUZP1Q86V48 1076 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 AQP12AQ8IXF9 295 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 KIRREL3Q8IZU9 778 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 SVOPLQ8N434 492 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 RASGEF1AQ8N9B8 481 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 TMEM185AQ8NFB2 350 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 OR2T6Q8NHC8 308 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 RAB3IL1Q8TBN0 382 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 GTF3AQ92664 365 aaKnown RBP4.75□□□□□ -1.65
RTF1-204ENST00000558117 LINC00479Q96M42 142 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 RAB17Q9H0T7 212 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 EXO5Q9H790 373 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 KLHL8Q9P2G9 620 aaPredicted RBP4.75□□□□□ -1.65
RTF1-204ENST00000558117 C19orf25Q9UFG5 118 aaPredicted RBP4.75□□□□□ -1.65
RTF1-204ENST00000558117 MAN1B1Q9UKM7 699 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 STUB1Q9UNE7 303 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 HEBP2Q9Y5Z4 205 aa4.75□□□□□ -1.65
RTF1-204ENST00000558117 C1orf232A0A0U1RR37 186 aa4.74□□□□□ -1.65
RTF1-204ENST00000558117 A0A1W2PP18 115 aa4.74□□□□□ -1.65
RTF1-204ENST00000558117 FAM25EA8MYX2 175 aa4.74□□□□□ -1.65
RTF1-204ENST00000558117 G3V3Y1 287 aa4.74□□□□□ -1.65
RTF1-204ENST00000558117 KLF11O14901 512 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms