RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 OCLNQ16625 522 aa15.06■□□□□ 0
SNX1-203ENST00000558040 ZNF324BQ6AW86 544 aaPredicted RBP15.06■□□□□ 0
SNX1-203ENST00000558040 ABLIM2Q6H8Q1 611 aa15.06■□□□□ 0
SNX1-203ENST00000558040 ZNF786Q8N393 782 aa15.06■□□□□ 0
SNX1-203ENST00000558040 OR52E2Q8NGJ4 325 aa15.06■□□□□ 0
SNX1-203ENST00000558040 OR4K13Q8NH42 304 aa15.06■□□□□ 0
SNX1-203ENST00000558040 ROBO4Q8WZ75 1007 aa15.06■□□□□ 0
SNX1-203ENST00000558040 UBE2FQ969M7 185 aa15.06■□□□□ 0
SNX1-203ENST00000558040 RASD2Q96D21 266 aa15.06■□□□□ 0
SNX1-203ENST00000558040 WBP1Q96G27 269 aa15.06■□□□□ 0
SNX1-203ENST00000558040 LRR1Q96L50 414 aa15.06■□□□□ 0
SNX1-203ENST00000558040 KLHL13Q9P2N7 655 aa15.06■□□□□ 0
SNX1-203ENST00000558040 TNFRSF10DQ9UBN6 386 aa15.06■□□□□ 0
SNX1-203ENST00000558040 GPR52Q9Y2T5 361 aa15.06■□□□□ 0
SNX1-203ENST00000558040 ZNF175Q9Y473 711 aa15.06■□□□□ 0
SNX1-203ENST00000558040 ANKRD11Q6UB99 2663 aaPredicted RBP15.06■□□□□ 0
SNX1-203ENST00000558040 DMXL2Q8TDJ6 3036 aa15.05■□□□□ 0
SNX1-203ENST00000558040 SH3D21A4FU49 640 aa15.05■□□□□ -0
SNX1-203ENST00000558040 PRR23D1E9PI22 279 aaPredicted RBP15.05■□□□□ -0
SNX1-203ENST00000558040 AKAP8O43823 692 aaKnown RBP15.05■□□□□ -0
SNX1-203ENST00000558040 RAMP1O60894 148 aa15.05■□□□□ -0
SNX1-203ENST00000558040 SLC2A10O95528 541 aa15.05■□□□□ -0
SNX1-203ENST00000558040 RENP00797 406 aa15.05■□□□□ -0
SNX1-203ENST00000558040 PRR23D2P0DMB1 279 aaPredicted RBP15.05■□□□□ -0
SNX1-203ENST00000558040 FCGR2AP12318 317 aa15.05■□□□□ -0
SNX1-203ENST00000558040 HLA-DOBP13765 273 aa15.05■□□□□ -0
SNX1-203ENST00000558040 KLK2P20151 261 aa15.05■□□□□ -0
SNX1-203ENST00000558040 ACVR1BP36896 505 aa15.05■□□□□ -0
SNX1-203ENST00000558040 CXCR4P61073 352 aa15.05■□□□□ -0
SNX1-203ENST00000558040 SLC17A1Q14916 467 aa15.05■□□□□ -0
SNX1-203ENST00000558040 PON3Q15166 354 aa15.05■□□□□ -0
SNX1-203ENST00000558040 TMEM201Q5SNT2 666 aa15.05■□□□□ -0
SNX1-203ENST00000558040 C6orf141Q5SZD1 244 aa15.05■□□□□ -0
SNX1-203ENST00000558040 UGT2A3Q6UWM9 527 aa15.05■□□□□ -0
SNX1-203ENST00000558040 CXXC5Q7LFL8 322 aaKnown RBP15.05■□□□□ -0
SNX1-203ENST00000558040 SDR9C7Q8NEX9 313 aa15.05■□□□□ -0
SNX1-203ENST00000558040 OR9K2Q8NGE7 335 aa15.05■□□□□ -0
SNX1-203ENST00000558040 ZNF519Q8TB69 540 aa15.05■□□□□ -0
SNX1-203ENST00000558040 ZPLD1Q8TCW7 415 aa15.05■□□□□ -0
SNX1-203ENST00000558040 APH1BQ8WW43 257 aa15.05■□□□□ -0
SNX1-203ENST00000558040 ASB10Q8WXI3 467 aa15.05■□□□□ -0
SNX1-203ENST00000558040 HDAC2Q92769 488 aaKnown RBP15.05■□□□□ -0
SNX1-203ENST00000558040 ADAD1Q96M93 576 aaKnown RBP15.05■□□□□ -0
SNX1-203ENST00000558040 SNX18Q96RF0 628 aa15.05■□□□□ -0
SNX1-203ENST00000558040 TUBA1CQ9BQE3 449 aa15.05■□□□□ -0
SNX1-203ENST00000558040 YTHDF1Q9BYJ9 559 aaKnown RBP15.05■□□□□ -0
SNX1-203ENST00000558040 H2AFY2Q9P0M6 372 aaPredicted RBP15.05■□□□□ -0
SNX1-203ENST00000558040 KLHL9Q9P2J3 617 aa15.05■□□□□ -0
SNX1-203ENST00000558040 BLOC1S6Q9UL45 172 aa15.05■□□□□ -0
SNX1-203ENST00000558040 MED12Q93074 2177 aa15.05■□□□□ -0
SNX1-203ENST00000558040 CLCA1A8K7I4 914 aa15.04■□□□□ -0
SNX1-203ENST00000558040 TRAF3IP2O43734 574 aaPredicted RBP15.04■□□□□ -0
SNX1-203ENST00000558040 WBP4O75554 376 aaKnown RBP15.04■□□□□ -0
SNX1-203ENST00000558040 PTGS2P35354 604 aa15.04■□□□□ -0
SNX1-203ENST00000558040 SLC16A1P53985 500 aa15.04■□□□□ -0
SNX1-203ENST00000558040 RASGEF1BQ0VAM2 473 aa15.04■□□□□ -0
SNX1-203ENST00000558040 ITGADQ13349 1161 aa15.04■□□□□ -0
SNX1-203ENST00000558040 CRMP1Q14194 572 aa15.04■□□□□ -0
SNX1-203ENST00000558040 MELKQ14680 651 aa15.04■□□□□ -0
SNX1-203ENST00000558040 RNPS1Q15287 305 aaKnown RBP15.04■□□□□ -0
SNX1-203ENST00000558040 ST3GAL2Q16842 350 aa15.04■□□□□ -0
SNX1-203ENST00000558040 MESTQ5EB52 335 aa15.04■□□□□ -0
SNX1-203ENST00000558040 RBM48Q5RL73 367 aaKnown RBP15.04■□□□□ -0
SNX1-203ENST00000558040 ARMC4Q5T2S8 1044 aa15.04■□□□□ -0
SNX1-203ENST00000558040 EEF1A1P5Q5VTE0 462 aa15.04■□□□□ -0
SNX1-203ENST00000558040 GTF2IRD2BQ6EKJ0 949 aa15.04■□□□□ -0
SNX1-203ENST00000558040 LEG1Q6P5S2 330 aa15.04■□□□□ -0
SNX1-203ENST00000558040 CREB3L2Q70SY1 520 aa15.04■□□□□ -0
SNX1-203ENST00000558040 GTF2IRD2Q86UP8 949 aa15.04■□□□□ -0
SNX1-203ENST00000558040 CPOQ8IVL8 374 aa15.04■□□□□ -0
SNX1-203ENST00000558040 GID4Q8IVV7 300 aa15.04■□□□□ -0
SNX1-203ENST00000558040 MCEMP1Q8IX19 187 aa15.04■□□□□ -0
SNX1-203ENST00000558040 SLC37A3Q8NCC5 494 aa15.04■□□□□ -0
SNX1-203ENST00000558040 RNF128Q8TEB7 428 aa15.04■□□□□ -0
SNX1-203ENST00000558040 RFKQ969G6 155 aa15.04■□□□□ -0
SNX1-203ENST00000558040 OTULINQ96BN8 352 aa15.04■□□□□ -0
SNX1-203ENST00000558040 SNRNP40Q96DI7 357 aaKnown RBP15.04■□□□□ -0
SNX1-203ENST00000558040 CNTNAP3BQ96NU0 1288 aa15.04■□□□□ -0
SNX1-203ENST00000558040 CNTNAP3Q9BZ76 1288 aa15.04■□□□□ -0
SNX1-203ENST00000558040 HINT3Q9NQE9 182 aaKnown RBP15.04■□□□□ -0
SNX1-203ENST00000558040 DNAJC27Q9NZQ0 273 aa15.04■□□□□ -0
SNX1-203ENST00000558040 EMC3Q9P0I2 261 aa15.04■□□□□ -0
SNX1-203ENST00000558040 MYRFQ9Y2G1 1151 aa15.04■□□□□ -0
SNX1-203ENST00000558040 PCDHGB5Q9Y5G0 923 aa15.04■□□□□ -0
SNX1-203ENST00000558040 CACNA1GO43497 2377 aa15.04■□□□□ -0
SNX1-203ENST00000558040 KIAA1549Q9HCM3 1950 aa15.04■□□□□ -0
SNX1-203ENST00000558040 SLC22A20A6NK97 555 aa15.03■□□□□ -0
SNX1-203ENST00000558040 ZNF726A6NNF4 738 aa15.03■□□□□ -0
SNX1-203ENST00000558040 AHRRA9YTQ3 701 aa15.03■□□□□ -0
SNX1-203ENST00000558040 KDM4EB2RXH2 506 aaPredicted RBP15.03■□□□□ -0
SNX1-203ENST00000558040 GPR171O14626 319 aa15.03■□□□□ -0
SNX1-203ENST00000558040 ARHGEF9O43307 516 aa15.03■□□□□ -0
SNX1-203ENST00000558040 AHCYL1O43865 530 aa15.03■□□□□ -0
SNX1-203ENST00000558040 WISP2O76076 250 aa15.03■□□□□ -0
SNX1-203ENST00000558040 TNFAIP8O95379 198 aa15.03■□□□□ -0
SNX1-203ENST00000558040 CCDC159P0C7I6 412 aa15.03■□□□□ -0
SNX1-203ENST00000558040 FMO3P31513 532 aa15.03■□□□□ -0
SNX1-203ENST00000558040 BIDP55957 195 aa15.03■□□□□ -0
SNX1-203ENST00000558040 ZNF362Q5T0B9 420 aaPredicted RBP15.03■□□□□ -0
SNX1-203ENST00000558040 NXNL2Q5VZ03 156 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms